Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000030_10775818_10796010 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 10773601 ~ 10796653 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Zgc:171601 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000030_10775818_10796010.mRNA | True | 5404 | mRNA | 0.38 | 16 | 10773601 | 10796653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_10766284_10769462 | NA | coding | upstream | 4117 | 10766284 ~ 10769484 (+) |
| CI01000030_10753303_10762765 | NA | coding | upstream | 10836 | 10753303 ~ 10762765 (+) |
| CI01000030_10738658_10751094 | NA | coding | upstream | 22053 | 10738087 ~ 10751548 (+) |
| CI01000030_10716988_10729316 | NA | coding | upstream | 43939 | 10716429 ~ 10729662 (+) |
| CI01000030_10689813_10702377 | NA | coding | upstream | 70608 | 10689448 ~ 10702993 (+) |
| CI01000030_10860938_10862107 | S1PR4 | coding | downstream | 64115 | 10860768 ~ 10862292 (+) |
| CI01000030_10911224_10918511 | NA | coding | downstream | 111713 | 10908366 ~ 10918929 (+) |
| CI01000030_10936461_10939911 | NA | coding | downstream | 139808 | 10936461 ~ 10940790 (+) |
| CI01000030_10958494_10960930 | TNFAIP8L1 | coding | downstream | 160504 | 10957157 ~ 10962204 (+) |
| CI01000030_10968005_10969830 | NA | coding | downstream | 170453 | 10967106 ~ 10970051 (+) |
| G162306 | NA | non-coding | upstream | 61427 | 10704921 ~ 10712174 (+) |
| G162356 | NA | non-coding | upstream | 103764 | 10668821 ~ 10669837 (+) |
| G162379 | NA | non-coding | upstream | 104925 | 10668399 ~ 10668676 (+) |
| G162365 | NA | non-coding | upstream | 122730 | 10650424 ~ 10650871 (+) |
| G162722 | NA | non-coding | upstream | 131568 | 10641805 ~ 10642033 (+) |
| G162813 | NA | non-coding | downstream | 53991 | 10850644 ~ 10850977 (+) |
| G162817 | NA | non-coding | downstream | 57830 | 10854483 ~ 10854985 (+) |
| G162818 | NA | non-coding | downstream | 59396 | 10856049 ~ 10856468 (+) |
| G162819 | NA | non-coding | downstream | 60205 | 10856858 ~ 10857092 (+) |
| G162822 | NA | non-coding | downstream | 73881 | 10870534 ~ 10871180 (+) |
| CI01000030_10473378_10509560 | NA | other | upstream | 271958 | 10471835 ~ 10511071 (+) |
| G162297 | NA | other | upstream | 552377 | 10133299 ~ 10221224 (+) |
| CI01000030_10039688_10047019 | NA | other | upstream | 727718 | 10039358 ~ 10047210 (+) |
| G162449 | NA | other | upstream | 1416587 | 9356403 ~ 9357014 (+) |
| G162821 | NA | other | downstream | 69359 | 10866012 ~ 10868440 (+) |
| CI01000030_11362386_11380216 | CALR3A, CALR3, CALR3B | other | downstream | 544102 | 11362114 ~ 11380772 (+) |
| G162951 | NA | other | downstream | 695948 | 11492601 ~ 11496119 (+) |
