CI01000036_01466321_01474630


Basic Information

Item Value
gene id CI01000036_01466321_01474630
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 1465479 ~ 1474630 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_01466321_01474630.mRNA
GTGTGGATCCCAAGTCCGTGCTGTGTGCTTTCTTTAAGCAAGGCCAATGTACCAAAGGTGATAAGTGTAAATTCTCTCATGACCTCTCGTTGGAGAGGAAATGTGAGAAAAGAAGCGTGTATGTGGACGGCAGAGATGAAGAGCTGGAGAAAGACACCATGGATAATTGGGATGAAAAGAAACTTGAAGAGGTTGTAAACAAGAAGCATGGAGAAGCTGAAAAGAAGAAAGCGAAGACACAAATTGTGTGCAAGTATTTCCTTGATGCTATTGAAAACAACAAATACGGCTGGTTTTGGGTTTGTCCCGGTGGAGGTGACAACTGTATGTACCGCCACGCTCTTCCTGTGGGCTTTGTTCTGAAGAAAGACAAGAAGAAAGAAGAGAAGATTGAGGAGGAGATCTCGTTGGAGGATTTGATAGAGACTGAGCGATCTGCCCTGGGAGCAAACGTCACTCGAATTACTCTTGAAACATTCTTGGCCTGGAAGAAAAGGAAAAGGCAAGAGAAAATGGCTAAAGCAGAGCAGGACATGGAGAGAAAGAAAGCCGACTTCAAAGCTGGCAGAGCGCTTGGAGTGGAGGACTCGGATGAAGTTCATGACCTTGACATTGCTAGATTTATCCCTAAAGAGGTGGATCACGCGGGTATAACGATGGCGTCAGCGGACAGGTTTACTGCCAGAGCCCCTCCTTCAAATGATACAGATGACAATAAATTGAGCGAGGCCTCAGGCGGAGCCATGGAGAACGGAGAACACAGCCCAGACCAGACACTTGAGGACGGTGAAACCAATGATGAAGACGAGACAGAGGCGGTGCCAGTAGACGAGAACCTCTTTACAGGGGAGGACCTAGACGAACTGGAGGAGGAGCTCAACACACTGGACCTGGACGAGTGAAGACTAGGACTGTTGCATTATTCATGAACTACACATGGCTTGAAGTGAATGACAATATTTTCACAAATAACTACCACCAGAATTGCCATGTCAGAAACCGCTCTGCCTGCAATATGCACCCTCATCACTCGAGATGTCCCGGGACGCTAAAGGAGAGACGGGAGTAGGTGTTCTTGTTCTCTCTAAGATTTAACTCTTTGCCCTGTTCCTTTTTTTTTTTTTTTTTTTTTTAAATTGCAGTCTACCCCAAAAGCACAGTCAAGTGAGGGTCTGGTTCTACAGTGGAAACATGCTCCAAATATTTATGAGGCTGTTGATTTGATATTTCTGCGTTCTCTTTTGAAAGATTTGATTAAATGATCATCTTTGTAAGGTCATGCGTATGAAACGATCCAGCATAAATCCTCTTCGAGACGTTCAAGCACTATTGGAATCTGGTTTCCTCTTCTCTGCTGATTAAATGTTGCTTTAATGAAGACAAAGAATCAGTTGATCGGTATCATTACAGTTTTTAACATGTAACCAACTGCATGCCTGTATCAGGATCAGAATGTAAATGCTGAATAAGTGTGATGCTGACGTTCAAGTGTTCAATAATCAGTTGATCAGATTGAGGTGTTGAATGTGAAATCTCTCGGATACAGATGTGGCATCTTTGCCTTATAGAAGGAGATGTGGAAGACGACATCATTACTAGTCAAATATGATGTTTAAAGTGTTTTCAGGAAGTGAGAAAGTGACAGAGATGAGCTTGTGAGATGAACTAGTAATGTCTGTCGTTTTTCTATTCAATTGTTTTAAACTGCCCTCCCACCAACACAACACAAGAAATTGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_01466321_01474630.mRNA True 1744 mRNA 0.43 6 1465479 1474630

Neighbor

gene id symbol gene type direction distance location
CI01000036_01428324_01454913 ITGAV coding downstream 9694 1428287 ~ 1455785 (-)
CI01000036_01417031_01422737 UMPS coding downstream 42742 1416887 ~ 1422737 (-)
CI01000036_01406109_01409167 CRYBA2B, CRYBA2, CRYBA2A coding downstream 56013 1406051 ~ 1409466 (-)
CI01000036_01396572_01398922 FEV coding downstream 66557 1396055 ~ 1398922 (-)
CI01000036_01265331_01269187 NA coding downstream 196268 1264724 ~ 1269211 (-)
CI01000036_01475403_01476425 NA coding upstream 773 1475403 ~ 1476691 (-)
CI01000036_01611248_01620780 ZNF804A coding upstream 136489 1611119 ~ 1621389 (-)
CI01000036_01763171_01765280 NA coding upstream 287845 1762475 ~ 1765385 (-)
CI01000036_01782319_01786637 NUP35 coding upstream 307331 1781961 ~ 1786637 (-)
CI01000036_01839255_01848818 CUNH3ORF70 coding upstream 362519 1837149 ~ 1848818 (-)
G174028 NA non-coding downstream 136814 1328395 ~ 1328665 (-)
G174025 NA non-coding downstream 142642 1322626 ~ 1322837 (-)
G174014 NA non-coding downstream 163167 1301935 ~ 1302312 (-)
G173998 NA non-coding downstream 197793 1267166 ~ 1267686 (-)
G173782 NA non-coding downstream 453712 1011412 ~ 1011767 (-)
G174084 NA non-coding upstream 14444 1489074 ~ 1489537 (-)
G174090 NA non-coding upstream 22189 1496819 ~ 1497055 (-)
G174092 NA non-coding upstream 28661 1503291 ~ 1503644 (-)
G174100 NA non-coding upstream 41278 1515908 ~ 1516157 (-)
G174102 NA non-coding upstream 42421 1517051 ~ 1517420 (-)
G174002 NA other downstream 190284 1274778 ~ 1275195 (-)
G173528 NA other downstream 505102 959421 ~ 960377 (-)
G174386 NA other upstream 390304 1864934 ~ 2010840 (-)
CI01000036_02022324_02026053 NA other upstream 551278 2021947 ~ 2031983 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037674 zc3h15 coding NC_007120.7 CM002893.2 11664797 ~ 11676491 (-)