G173196


Basic Information

Item Value
gene id G173196
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 512857 ~ 513107 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU196749
GACTTGACCATGTTGTGAGGGTTGTTAAACTCATTGTGGTGTTTCACGTAGAAACCGCTCTCATGTGCTCTAATAAATAGGGCTGTCAATAAATAAAAATTTTTTAATTGTGAATAATCGCACACTTTACTATCCCATAAGGCCACGGGAGAGGATTTGTGAATGGCAGTGAAGTGACGCAACTGACGCTGGTAGGTCACATGATAATGCATGCCAGGGTGTTGCATATCCAGATTACATTTTAACTACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196749 True 251 lncRNA 0.40 1 512857 513107

Neighbor

gene id symbol gene type direction distance location
CI01000036_00457595_00467133 TTF2 coding upstream 45724 457595 ~ 467133 (+)
CI01000036_00322865_00441961 IGSF3 coding upstream 70896 322865 ~ 441961 (+)
CI01000036_00234733_00237131 NA coding upstream 275513 233732 ~ 237344 (+)
CI01000036_00230834_00232989 NA coding upstream 279865 229638 ~ 232992 (+)
CI01000036_00134824_00154438 RAMP1 coding upstream 358386 134673 ~ 154471 (+)
CI01000036_00542557_00543309 NXPH2, NXPH2A coding downstream 29450 542557 ~ 543386 (+)
CI01000036_00947110_00948159 CXCR4B coding downstream 434003 947110 ~ 948666 (+)
CI01000036_00975332_00984107 DARS, SYDC, DARS.L coding downstream 462225 975332 ~ 984315 (+)
CI01000036_00999312_01007326 GMPPAA, GMPPA, GMPAA coding downstream 486205 999312 ~ 1007363 (+)
CI01000036_01140528_01239535 ASIC4, ASIC4A coding downstream 627421 1140528 ~ 1239535 (+)
G173148 NA non-coding upstream 8126 498964 ~ 504731 (+)
G173149 NA non-coding upstream 17559 494127 ~ 495298 (+)
G173189 NA non-coding upstream 24946 487615 ~ 487911 (+)
G173159 NA non-coding upstream 64849 447170 ~ 448008 (+)
G173171 NA non-coding upstream 231357 281283 ~ 281500 (+)
G173155 NA non-coding downstream 1973 515080 ~ 516137 (+)
G173197 NA non-coding downstream 4436 517543 ~ 518047 (+)
G173147 NA non-coding downstream 33592 546699 ~ 553330 (+)
G173217 NA non-coding downstream 67997 581104 ~ 587989 (+)
G173245 NA non-coding downstream 205846 718953 ~ 720565 (+)
G173152 NA other upstream 34686 475352 ~ 478171 (+)
G173157 NA other downstream 66955 580062 ~ 581006 (+)
G173327 NA other downstream 350188 863295 ~ 864154 (+)
G174214 NA other downstream 1233245 1746352 ~ 1747188 (+)
G174289 NA other downstream 1471777 1984884 ~ 2006413 (+)

Expression


Co-expression Network