G184979


Basic Information

Item Value
gene id G184979
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 2439791 ~ 2440001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210072
GGCTGTAGAAGTGCAGTTCATTATTAGTTCATGTTAATTAGTTAACTAATGTTAACTAATGAACCTTATTGTGAAGTGTTACCCTGAAAACATTCTAGAGGGTGCAGGTCTTGCTATAACACTCTAACACCAGTTAAAGTTGGCATGAAATGGAAGTAAACTATGGAAGCCCGTTTCCGCCACAGTAAAGTAAAAAATATGATTCTTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210072 True 211 lncRNA 0.36 1 2439791 2440001

Neighbor

gene id symbol gene type direction distance location
CI01000040_02315449_02344137 GABRQ, GABRB4 coding upstream 95478 2315449 ~ 2344313 (+)
CI01000040_01882704_01887004 BRCC3 coding upstream 552656 1881793 ~ 1887135 (+)
CI01000040_01876498_01878546 FUNDC2 coding upstream 560483 1876498 ~ 1879308 (+)
CI01000040_01760148_01802721 AMMECR1 coding upstream 636789 1760148 ~ 1803002 (+)
CI01000040_01728828_01731709 KIF4A coding upstream 707559 1727772 ~ 1732232 (+)
CI01000040_02444252_02460962 NA coding downstream 3560 2443561 ~ 2460962 (+)
CI01000040_02475489_02482435 NA coding downstream 35488 2475489 ~ 2482515 (+)
CI01000040_02558495_02563310 NA coding downstream 118382 2558383 ~ 2563546 (+)
CI01000040_02602517_02603172 NA coding downstream 162356 2602357 ~ 2603623 (+)
CI01000040_02609749_02611069 ARHGAP26 coding downstream 169748 2609749 ~ 2611235 (+)
G184976 NA non-coding upstream 4805 2434784 ~ 2434986 (+)
G184418 NA non-coding upstream 70145 2369395 ~ 2369646 (+)
G184417 NA non-coding upstream 70417 2368819 ~ 2369374 (+)
G184416 NA non-coding upstream 71171 2368207 ~ 2368620 (+)
G184415 NA non-coding upstream 71840 2367636 ~ 2367951 (+)
G184981 NA non-coding downstream 1610 2441611 ~ 2441832 (+)
G184982 NA non-coding downstream 1977 2441978 ~ 2442220 (+)
G184987 NA non-coding downstream 101170 2541171 ~ 2541411 (+)
G184989 NA non-coding downstream 102804 2542805 ~ 2543132 (+)
G185028 NA non-coding downstream 158520 2598521 ~ 2598937 (+)
G184003 NA other upstream 1203302 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 1461628 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2162936 240849 ~ 313275 (+)
G183420 NA other upstream 2274869 157543 ~ 164922 (+)
G183366 NA other upstream 2379394 53691 ~ 60397 (+)
G185296 NA other downstream 893577 3333578 ~ 3333983 (+)
G185884 NA other downstream 1298986 3738987 ~ 3739281 (+)
G185947 NA other downstream 1533764 3973765 ~ 3974123 (+)
G187510 NA other downstream 3529044 5969045 ~ 5971732 (+)
G188149 NA other downstream 4368690 6808691 ~ 6809130 (+)

Expression


Co-expression Network