CI01000050_00675537_00675797


Basic Information

Item Value
gene id CI01000050_00675537_00675797
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 674960 ~ 676172 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00675537_00675797.mRNA
ATAAAAGGTTCCATAAAGAAACCGCACTTACCAGAAATATGATAGAATATGATTCTAATCGAGCGGCTGTGGAACATGAGATATTATTTACTGCATGGGCAAATGTCACTTTAAGAGCGTGGCCTTTAAATGCTACCAATGCTAATGTAATCGACGAACACTTAATCATAACAATTAAATATGCATTTGAATCGTGCAAAATACTGAGGTAAAGTCAACATTGTTAAATGCCTCAAAATCCCTCGTTTTATTTAAGAGCGAGCGTTTTGCAAATGAATGAACGCTTGAAACGCTGACGATGAGCTCGAGCTCTGCAGGTGCGACACATATTCAGCTCCAAAATCCTCCATCATATGAAACGAACATAAAGCAGTGATGCGAACTCACATGTGCTCGTGCTGTACGGTGAAACCTCCGGTGTCGCGCGCTGGGTTTGATGATGGAGAAAGATCACCGGCGGTGTTTAACGCGGCAGAGATGACGGGCAGACCGCAACAAATCACGCGTATGACAACGACACTCTGCAGTAGTGTCGCGTCGAAGTCCAGTCGGGCTTTAAACACACGCTATCGTCGCGCTCGTGTCTCACTCACCTCGGCATCCCTGGAAATTTCTCCGTGTGAAAAGGAGTGCTGAATCCCTGCTTTAGTGGATCTGCTCCTCCACGCCCATCTGAGACCGAGTCGCGCTAATGAAATGGAACATTCCAAACATTCCTCTGCCTCCTCATTAATACAGGCATCTTACCTTTCACACGTTACATGATCATCACCATCATCATCATCAGGGCAGCCCTTGCTTTCTTCACAGTCCCTGGTCTTCATGGTATATCATTCGCCAAACATGTTCCCCAAAAAAGTCATGCAGGTTTGGAACAAGATGAGGGCGAGTAAATGGTGACAGTGTTCTTTTTTGGGAGAATGATTCCTCATTTAGTCACATTTAATGTGGGAAGGAAGGGGAATCTTCAGAATGTTCAAAACAGCATTCCAAAAGTTCTTTCATTTAAGACAGATACCACAAGAAAAGACACAAATAGCTGTTTCAATGCATCATGTTTTACAGACTAACCTGTGATGAAGGTGTGTGTTATTGAATTCCCTCCATGTGTAACACAACCCCAGTTTGGCTCGGATATTCACTGTGAAATTTGAGTCGTGCCGCTTTCTCTTTCTCTACATCTACAGACACCAGTTTATGCTTTAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00675537_00675797.mRNA True 1213 mRNA 0.43 1 674960 676172

Neighbor

gene id symbol gene type direction distance location
CI01000050_00662789_00668402 NINJ1 coding downstream 6558 661076 ~ 668402 (-)
CI01000050_00560254_00585128 BRPF1 coding downstream 88648 559983 ~ 586312 (-)
CI01000050_00552377_00552664 NA coding downstream 122099 551489 ~ 552861 (-)
CI01000050_00468156_00477480 CRELD1 coding downstream 197480 467368 ~ 477480 (-)
CI01000050_00362015_00370409 TMCC1 coding downstream 304551 360400 ~ 370409 (-)
CI01000050_00786890_00789088 NA coding upstream 110462 786634 ~ 789088 (-)
CI01000050_00793175_00797131 NA coding upstream 116903 793075 ~ 798370 (-)
CI01000050_00849460_00849759 NA coding upstream 172844 849016 ~ 850294 (-)
CI01000050_01118519_01162499 CACNA2D3A coding upstream 442347 1118519 ~ 1162499 (-)
CI01000050_01319798_01336147 NA coding upstream 642918 1319090 ~ 1336696 (-)
G213365 NA non-coding downstream 3127 671541 ~ 671833 (-)
G213363 NA non-coding downstream 4433 670314 ~ 670527 (-)
G213207 NA non-coding downstream 20382 650908 ~ 654578 (-)
G213357 NA non-coding downstream 27672 647077 ~ 647288 (-)
G213391 NA non-coding upstream 40710 716882 ~ 718297 (-)
G213395 NA non-coding upstream 69786 745958 ~ 746612 (-)
G213397 NA non-coding upstream 72339 748511 ~ 748716 (-)
G213405 NA non-coding upstream 89473 765645 ~ 768598 (-)
G213403 NA non-coding upstream 96777 772949 ~ 773661 (-)
G213174 NA other downstream 421898 235551 ~ 253062 (-)
G213171 NA other downstream 656979 16080 ~ 17981 (-)
G213429 NA other upstream 153170 829342 ~ 829802 (-)
G213497 NA other upstream 307306 983478 ~ 996539 (-)
G213704 NA other upstream 636811 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1556476 2228865 ~ 2233429 (-)
G213948 NA other upstream 1652341 2328513 ~ 2331316 (-)

Expression


Co-expression Network