CI01000050_00849460_00849759


Basic Information

Item Value
gene id CI01000050_00849460_00849759
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 849016 ~ 850294 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00849460_00849759.mRNA
ATTATACTATAATAAGAGTGACTGGCAGCATGCAAAGATGCAACTCATATAGCATAGATGGCATTCACTTCCATATAGGACAGATTGCGTTCATACCAACAGTGACACGAACCCCAGACCAAGTATACTTGAGGTAATCTTCAAACCAAACTCTCTGGTCGGCACCCACAGCTCTAATGTGAAACCACAATGTACTTCCTGTTGGGGGCCTAGTTAGCCAGGATCCCCAAGAGACTGCCTGATAAGAAATTAATTTTGAGAGTCACTCCACAGGACTGCCTAATTAGCAGTGGTGGATGAAGTACACAAATCAAGTACTTGAGTAAAAGTATGAATACCCTAATAAAATATTACTCCAGTAAAAGTATTAAGTACTTCTTTTCAGTTTTACTTCAGTAAAAGTACAAAAGTACTTGACTTTTAATGTACTCGAGTACATTAGACCGGGCCAGTAGAAAAAATACTTGGCGTTGATCCCTGAGGGATATCCAAGTTATGAAAATATCAAAGAAAAAAACAGAAATGGCATGGTGACATGTCATGTCAGCTGCCCGTATATTTGTCCTATAATGACAAGTTGTACTTTGGTTTGTTACAGTGGAAGATCTGCTCCACAGGACTGGCAAAGCGCTGCAGAGCTGGCTTTCATCAGACACATGTGGTGACCGGCAGTTTAAAGAAGGAGAAGAGAGAGAAGATAAATCAATACTCATCCAGGATAAACAGCACACTGAAGAGGGATTACATCAACCCTCGAGAAGCAGCCAAAACACATCCATTCCTCATGAAACACAGTCTACGAAATGTGTCGGAGAAACATCGCCTGCTCTTCTGAGCATTAGTGCCGTACCGTCTGACTGCACTAAACTGGTAGAACTGCATAAAACTGAACAAACTGATGAAACTCTCCAAAATATCAGGTAAACCAGGGCCTGAATTTCATTTTGGAAAATGGTGAAAAGTCCCCCCTAGGTGATTGTTATGGGGGGATTTTTTTAATTTGAAGTGGGAGTGACTTTTTTTTTTTTTTTTTTTTAAATTACAACTGACACACACCCGCCTCCTGCCACTCACTTGTCTCATTCGCTCCGGTTGAATAGTGTTGGGTGTTAGGTCGTGACTTCTGAATTTCGGCAAGGGGTTGCAGGTAATGTGCATAATTTTAGTCATTCCTGCAGGTTTCACGCTCACACCAAAAAGCCGTCTCTTAAACAGCTCGCGAAAAACAAATTGAGCTCTTTTTCATGGCTTATTGCGCTTAAACGGTTAATAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00849460_00849759.mRNA True 1279 mRNA 0.41 1 849016 850294

Neighbor

gene id symbol gene type direction distance location
CI01000050_00793175_00797131 NA coding downstream 50646 793075 ~ 798370 (-)
CI01000050_00786890_00789088 NA coding downstream 59928 786634 ~ 789088 (-)
CI01000050_00675537_00675797 NA coding downstream 172844 674960 ~ 676172 (-)
CI01000050_00662789_00668402 NINJ1 coding downstream 180614 661076 ~ 668402 (-)
CI01000050_00560254_00585128 BRPF1 coding downstream 262704 559983 ~ 586312 (-)
CI01000050_01118519_01162499 CACNA2D3A coding upstream 268225 1118519 ~ 1162499 (-)
CI01000050_01319798_01336147 NA coding upstream 468796 1319090 ~ 1336696 (-)
CI01000050_01447924_01453746 EXORH, RHO coding upstream 597128 1447422 ~ 1453836 (-)
CI01000050_01513337_01523389 GNB4, GNB1, GNB2, GNB1.S, OL-GB1, GNB1A, GNB1B coding upstream 662532 1512826 ~ 1523632 (-)
CI01000050_01563629_01592766 CFAP74 coding upstream 713161 1563455 ~ 1593012 (-)
G213441 NA non-coding downstream 15650 832650 ~ 833366 (-)
G213428 NA non-coding downstream 19869 828749 ~ 829147 (-)
G213427 NA non-coding downstream 20347 828274 ~ 828669 (-)
G213403 NA non-coding downstream 75355 772949 ~ 773661 (-)
G213405 NA non-coding downstream 80418 765645 ~ 768598 (-)
G213434 NA non-coding upstream 20033 870327 ~ 871656 (-)
G213431 NA non-coding upstream 49198 899492 ~ 903682 (-)
G213468 NA non-coding upstream 57554 907848 ~ 908122 (-)
G213485 NA non-coding upstream 92792 943086 ~ 943240 (-)
G213496 NA non-coding upstream 101492 951786 ~ 952009 (-)
G213429 NA other downstream 19214 829342 ~ 829802 (-)
G213174 NA other downstream 595954 235551 ~ 253062 (-)
G213171 NA other downstream 831035 16080 ~ 17981 (-)
G213497 NA other upstream 133184 983478 ~ 996539 (-)
G213704 NA other upstream 462689 1312983 ~ 1317106 (-)
CI01000050_02230904_02233429 NA other upstream 1382354 2228865 ~ 2233429 (-)
G213948 NA other upstream 1478219 2328513 ~ 2331316 (-)
G214017 NA other upstream 1611882 2462176 ~ 2464698 (-)

Expression


Co-expression Network