CI01000050_01725724_01732620


Basic Information

Item Value
gene id CI01000050_01725724_01732620
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1725709 ~ 1733001 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_01725724_01732620.mRNA
ATACTCGTTCTGTTGCCTGACAAAAAAATAAAAATTATATATATATATATATATATATATATATATATATATATATATATATATGAAATAAGAACAGCTTTATTTGACATTCGGCTATATTGTATTAAAATACAGTATGTGAGCACGAAATAGGAGAGAAAACACATTAGGCAGAATGCAACCGACGTGATGACGTCACGAATATGCTAATTGACGCATGATGTCATCTAGTGACATTTAGCGACTTTTTGGGCAGGCTTTAGCTACTTTCCTTTGAAAACAGCTGGCCACATTGAGAAGAACGAACGGATCCAGACCAGGGAGCATAGACTGAAAGAGGAGGGAGTTAGCTAGTAAAGGAAAAAGTTAAGATTAAACTAAATGCGGCGGTGGTTGGGACAGATTTCTGGGGGCGAGAAGAGGAATGAGGCAGGGGAGGAGGATATCGACAGAGAAACGAAGAAAAGAAAATTTAATGCCAAATGGCTGACGGGTCGTGAATGGCTTGTGTTTGATCACGAAAATGTCGTCATGTTTTGTCAGGATTGCCGCATATACGCGAAAGAAAAAAACAAAACGAGCAATTTCGTGGTGGGAACTAATAATTTGATTTGTTTGACAAAGAATGGAAATATCTGCAAGATGCTTGTGGAAACACAACCTGCACAAGATCTGATTTTTGAACTACTGTCTTCTTGTCTCTCAGTTTTCAACAAAATCCACTATTCTGTTATCTGCTGTAAAGGCATCCGAAATCATGTTTTGTGGCACTGCACAGAAGATACCAGCACAACTTGTGCTCCATGCCCTGAATTCACTTACATTGATGAACCCAACGGCTTATCAAAATGCTTTGTCTGTACTGTGTGTGATGCTAGCCGAGGGATAAGAGTGAAAAAAGCCTGTACTCGGTCGTCAGATACTGTTTGTGAGCCACTGGAACAATTCTACTGCATTGAAAAAAATAAAGATAGCTGTAGAAACGCTGTGAAACACTCTGAATGCAGCCCTGGACAATATATCAAACAAGCAGGAACTCCCTCCACAGATACAGTATGTGCAGATTGTGAAGTCGACACATATTCAAACGGCTCTTTTTCATCCTGTTTACCTCACACACAATGTGAAGCACTGGGACTTACTGAAACATCTCCAGGAACACAATCATCTGACAGTGAATGTGGAAACACCACTACTGCACACATTGCTATTGTTATAGTTACTTTAATAATAATAATAATTGCAGTAGAATACAGGTATAATTCAATTTTATGTCTTTTTTCACATTAAAGAGAAACAAATAAA

Function

NR:

description
Zgc:153759 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_01725724_01732620.mRNA True 1305 mRNA 0.38 7 1725709 1733001

Neighbor

gene id symbol gene type direction distance location
CI01000050_01715475_01720169 MRPS25 coding downstream 4766 1715068 ~ 1720943 (-)
CI01000050_01596404_01631248 NA coding downstream 94461 1596286 ~ 1631248 (-)
CI01000050_01563629_01592766 CFAP74 coding downstream 132697 1563455 ~ 1593012 (-)
CI01000050_01513337_01523389 GNB4, GNB1, GNB2, GNB1.S, OL-GB1, GNB1A, GNB1B coding downstream 202077 1512826 ~ 1523632 (-)
CI01000050_01447924_01453746 EXORH, RHO coding downstream 271873 1447422 ~ 1453836 (-)
CI01000050_01739921_01780306 NR2C2 coding upstream 6699 1739700 ~ 1780306 (-)
CI01000050_01820586_01825230 FGF17 coding upstream 87332 1820333 ~ 1826726 (-)
CI01000050_01909688_01930238 NR5A1A coding upstream 175980 1908981 ~ 1930578 (-)
CI01000050_01933295_01972409 NA coding upstream 200107 1933108 ~ 1972409 (-)
CI01000050_02057680_02112564 NA coding upstream 323979 2056980 ~ 2112737 (-)
G213647 NA non-coding downstream 23777 1701001 ~ 1701932 (-)
G213688 NA non-coding downstream 43492 1681407 ~ 1682217 (-)
G213676 NA non-coding downstream 44572 1680506 ~ 1681137 (-)
G213803 NA non-coding downstream 56283 1669200 ~ 1669426 (-)
G213802 NA non-coding downstream 59668 1665759 ~ 1666041 (-)
G213658 NA non-coding upstream 2486 1735487 ~ 1758124 (-)
G213836 NA non-coding upstream 133609 1866610 ~ 1866820 (-)
G213852 NA non-coding upstream 177167 1910168 ~ 1910544 (-)
G213648 NA non-coding upstream 215600 1948601 ~ 2053238 (-)
G213704 NA other downstream 408603 1312983 ~ 1317106 (-)
G213497 NA other downstream 730050 983478 ~ 996539 (-)
G213429 NA other downstream 895907 829342 ~ 829802 (-)
G213174 NA other downstream 1472647 235551 ~ 253062 (-)
G213171 NA other downstream 1707728 16080 ~ 17981 (-)
CI01000050_02230904_02233429 NA other upstream 499647 2228865 ~ 2233429 (-)
G213948 NA other upstream 595512 2328513 ~ 2331316 (-)
G214017 NA other upstream 729175 2462176 ~ 2464698 (-)
G214027 NA other upstream 824165 2557166 ~ 2572902 (-)
G214314 NA other upstream 1680447 3413448 ~ 3424257 (-)

Expression


Co-expression Network