G214314


Basic Information

Item Value
gene id G214314
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3413448 ~ 3424257 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU243162
AAATGACATTTATTTATGATTTTATTTGGCAAGCACATGGAGGATGCACACAAAAGTATTCTGTTTAGATGGGGTTTGTGTTGAACAATTCACAATGTTGTCTCTATTAAAATGTAAACAAGTGTAAATGTCAACATCACATATGTCTAAAGAATTTTTCAGGCAAAACAAGAGCTAATTTAATCAATCTGCTCTTTTATTCCAACCATTACTCCTGGTCGAAGGCTTCTGTGAATATTTAGTTTATACACAGAGTAACGTTTCAATTAAGTTTAATGGTGCAACTCAAAAATATTTGGTAGTGCCCCTTTACATCGCAGCTTATGCACAGCTAGTGCAACATACCTCTGGTCATCATTCACTTTCACTGTATGAAAAACAGCATCAACATTGGGCCTAACAGCTCCTTTTGTTTTCCATGACAGAAAAACTTTGGAATGATATGAAGGTGGGGTAAACGATGACAGAACTTTCATTTTAAGGCATTCAATTTCAACTCAGAATAAGAAATTCAACACAAGCCGTTGCATATAAAACAAAAGCTGATACATTTATTGATGCATTTTGAGCTAGAAATTTGATGTCAACTAAACGGCAAAGCGACAATCCCAATCGTAATGCATGCCTTTGGAGAAAACAGACTCACAACCAGTGTTTCAAAAGTCCATATCTGTTGACCTGCGTTGTCTCTCTCAAAACAAAGCAATGTTCCACATATTAAAATTTACTGCAGCCGTCTCATAAACATGACAAACAATGTTGAATTTAAACTGCTGTATACTCTGCAACCTTCAACCATATTCTTCGAGCGTATAAATCAAGGCTGGTACTTTTGTCTTGGCTGCAGGAGCGTGAGCTGGTAGCGGGAACAGGGTTCACTTGGCTGAAGCGAGTTTGCGTCTCTGTACGTGTAGTGATGCATCAGCCGCTGGCAGGGAGCCAGTCATCACTGGAAACAGCGTCTGCCGTCTGATGCATTTGTAGCACAGCACCTCGCTAAGAAGGGTCGTTCACACCGCTATAAATAAGGAGCTAACGGTTACAGTCGGCTTTCAGCAGGAGACGGCATTTACACTGTTAGCTACGCATTATAATATTTAATCACCCCTACTAACCTGCAGTCAATTTCACTGTAAACACAATTTATGTTGTAAACTCGTCAGCGAGAGTGATGTTTACAAGGTTCTTTATGCGGCATGAAAGGTTTCATGATTCGTTCGTCATCAGCCTTTATTGGATGTAATCCTTGTAGAGTAACATAAGTGTTACCCCACTTGATTTTAACGTACGGTCATTTCATTACATGAAGCGAAACATTTATAACATCTCTCTGACATAGTTTATTTTGGACGATATTTAATTCATTGAGAATTTCCTTCCAATTTCCTGTGATCATTATAAAACGCATCAAATCGGACTCGTTTAAGACATGAAGAGGAAAACCATAAGAACCTTTTCAAATACATATATTTATATAGCTTAAGTCTGACGCTGTACTGAGTACCATCAGGAAGAGAGCAGCAGTTGTGAGCCACTTGCTGCATCAATGATACAGGACAACAACATTAAGTAACAAAACTGGCCATCTATCAGCTCTTAATAATATAATTTCATCTACAGCTCTCATCGCCGTCGCTTTCACAAAAGCTACACTTCAAAAAGTTCTACATAAACGCATCCTGGTACAAAAAAAGCAACAAAATTCAAATAGTGTAATAAAAATAAGGGTAGAGTGTAAATATATATTCATATTTATACATTTCTAGATGTATTTACAGTTAAAGCCGTCAGTCAGATAAACGGAGTGCCCGTTGTTAAAATACATTCGGGCAGACCATTTAGTGAAATACATTTTCTTAAGAATTTGGTCTCGGAGGCAAAATAAAGGTCCTTGTTTAACACCGATAGAAAATATAAACACTCCCAACATCCGTCAATCTGTCCCGCACACAAAACAATGGCGAGGTTTTCTCTACTACAGATGACAGAGGTGGATATTTCCTACTGAAAAGTCTTGAGAAACATACACGTACCACTTTCTGCTCAAGTGCCCTATAGCTTTATAGCAACAACAGGTAAAGGGGTCAGTGAACGGCCGGTTTGTTCTCTTCCAGCTGTGTGAAACAAGCCGTATCATTGTGATGTCCATCTCAAGCGCTTCAGCTCTGTAGTGTGCTGTGTGGCAAAGCATTGTCTCCATGAGTTCATGAGTTGAGTCCAGCCAGCCGCACACTGAAGAGTGACTGGTGGAAGGTGAGGGAGCTCAGCGCTTTTTAAACGCCACTCCACGGTTGGGATGTGGGGGGAGTTTGGGCAGGCAGGGCTCATCAGCACCGGGGTCATGGGAGAACACAGAGTCTTCACCTGAAGAGCAGGTAGAGCTGCGTGTGTCTGGGAAATTTGGAGAAAACTGGTCCAGAGACACAGACAGGTCCAGATACTCCTGATTGGACGTCATAGAGAGGGTGCGGTCTAGATCTTCCACCAGCTGTTTGAAAGTGGGTCTCTGAGATGGAACGGCATGCCAGCAATCTCTCATCATCATATACAGTTCATGGGTACATGTGGAGGGCCGGTCCATGCGGTGGCCTTCCTTTAGCAGTTTAAAGAGTTCCTCAACAGGAACACCTGGGTACGGTGAGCCACCAAGAGTAAAGATCTCCCACAGCAACACCCCAAAAGACCACACGTCACTCTGATGGGTGTAAATGCGGTCGAACAGAGCTTCAGGCGCCATCCATTTCACTGGTAAACGACCATTGGTGGTCTTCTTGTAGTAATCAATATGATGGATGTCTCTGGCCAGGCCGAAGTCTGCTATCTTCATAACGTTATCTTCAGTTACCAGGACATTACGGGCAGCCAAGTCTCTATGAATGCACTTCTTGGATGCAAGGTACTCCATGCCACGAGCCACCTGGTAGGCGCAGGAGATCAGGTCTTTGATTGACATGTTCTCCACGGGCACCTGGTCGGGGTTGTAGCAGTACTCCATCCCAGGTGGACGGCGTACACGCAGATACTCTCTCAGATTCCCCTTTGCAGCGAACTCCACGATGACGTACAGCGGACCATCTTGTGTGCAGGCCCCCAGCAAGTTGATGATGTTCTTGTGTTTGCCAATAATCTTCATCATTTCCATCTCGGAGATGAGGTCTGACAGGTCCTTCTCTGTGGCGTCGGATTTGAGCATCTTGACAGCCACTTTGGTGACACGACTGGGTTTGTCTTTATCCATCCCCATAGCCTCGGCCATCATCACTTGCCCAAAGCAGCCCTCTCCAAGCGGCTTCCCAAGAACCAGCCTGAGACACACACACACACAATATCAATCACTGACACCGCACACTTCGCCAGGCCGTTTTTGTTCATATATGCATCTTTAGTTAGTGAATGATGTCTGTTACCTGTCTCTGTGTACCTCCCAGCGTGGGTCCTGTGGCAGTTCATATTCGGAGACCCCTGAGAGCATAGGAGAACCACTGGAGGAGAGACGGGAGGGGCGGACCAGCATCCCACCAGAGTGCATCGAAGAGCTGGAGTCCACAGACACTGTTACCTGTCTGCGCAGGGGGATGCTCTTGGCCAGCTTGTGGACAGCCAGCTGGCTGTTGAAGTCACTTTTCTTGGCTGAGCTGTGCATTTTGGCCAGCACGGCAGTCACCACCATCACACAGATAAGGAAGAAGCCCACGCAGTAGATCAGCACCTCCAGGTACGTCTGGTTTGGCAGTTGAGTTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243162 True 3744 TUCP 0.44 9 3413448 3424257

Neighbor

gene id symbol gene type direction distance location
CI01000050_03362364_03363241 NA coding downstream 49191 3362284 ~ 3364257 (-)
CI01000050_03142876_03156191 KLHL22 coding downstream 254884 3142811 ~ 3158564 (-)
CI01000050_02945824_02971282 GNA14, GNA14A coding downstream 442079 2944921 ~ 2971369 (-)
CI01000050_02785728_02797909 PHYHIP coding downstream 615539 2785556 ~ 2797909 (-)
CI01000050_02752537_02755836 COX5B.1, COX5B1, COX5B coding downstream 657612 2752032 ~ 2755922 (-)
CI01000050_03491159_03514757 NA coding upstream 66831 3491088 ~ 3514757 (-)
CI01000050_03635030_03637939 NA coding upstream 210316 3634573 ~ 3639160 (-)
CI01000050_03672005_03672822 NKX3-1 coding upstream 247649 3671906 ~ 3672888 (-)
CI01000050_03721951_03724091 NKX2.7 coding upstream 297540 3721797 ~ 3724452 (-)
CI01000050_03759473_03767344 STC1 coding upstream 335168 3759425 ~ 3767563 (-)
G214317 NA non-coding downstream 94319 3317809 ~ 3319129 (-)
G214334 NA non-coding downstream 121652 3290058 ~ 3291796 (-)
G214335 NA non-coding downstream 125798 3287303 ~ 3287650 (-)
G214282 NA non-coding downstream 169148 3237894 ~ 3244300 (-)
G214288 NA non-coding downstream 222391 3190855 ~ 3191057 (-)
G214408 NA non-coding upstream 27091 3451348 ~ 3451945 (-)
G214413 NA non-coding upstream 40012 3464269 ~ 3469715 (-)
G214433 NA non-coding upstream 145559 3569816 ~ 3570646 (-)
G214434 NA non-coding upstream 153613 3577870 ~ 3580653 (-)
G214448 NA non-coding upstream 165770 3590027 ~ 3590254 (-)
G214027 NA other downstream 840546 2557166 ~ 2572902 (-)
G214017 NA other downstream 948750 2462176 ~ 2464698 (-)
G213948 NA other downstream 1082132 2328513 ~ 2331316 (-)
CI01000050_02230904_02233429 NA other downstream 1172559 2228865 ~ 2233429 (-)
G213704 NA other downstream 2096342 1312983 ~ 1317106 (-)
G214436 NA other upstream 101559 3525816 ~ 3589057 (-)
CI01000050_04564233_04580815 KANSL3 other upstream 1139430 4563687 ~ 4581278 (-)
G215935 NA other upstream 1624659 5048916 ~ 5073109 (-)
G216093 NA other upstream 2065300 5489557 ~ 5552103 (-)

Expression


Co-expression Network