Gene
RNA
| Item | Value |
|---|---|
| gene id | G214334 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 3290058 ~ 3291796 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU243182 | True | 1673 | lncRNA | 0.37 | 2 | 3290058 | 3291796 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_03142876_03156191 | KLHL22 | coding | downstream | 131494 | 3142811 ~ 3158564 (-) |
| CI01000050_02945824_02971282 | GNA14, GNA14A | coding | downstream | 318689 | 2944921 ~ 2971369 (-) |
| CI01000050_02785728_02797909 | PHYHIP | coding | downstream | 492149 | 2785556 ~ 2797909 (-) |
| CI01000050_02752537_02755836 | COX5B.1, COX5B1, COX5B | coding | downstream | 534222 | 2752032 ~ 2755922 (-) |
| CI01000050_02528520_02596972 | TCF7L1B, TCF7L1, TCF7L1A | coding | downstream | 693086 | 2528520 ~ 2596972 (-) |
| CI01000050_03362364_03363241 | NA | coding | upstream | 70488 | 3362284 ~ 3364257 (-) |
| CI01000050_03491159_03514757 | NA | coding | upstream | 199292 | 3491088 ~ 3514757 (-) |
| CI01000050_03635030_03637939 | NA | coding | upstream | 342777 | 3634573 ~ 3639160 (-) |
| CI01000050_03672005_03672822 | NKX3-1 | coding | upstream | 380110 | 3671906 ~ 3672888 (-) |
| CI01000050_03721951_03724091 | NKX2.7 | coding | upstream | 430001 | 3721797 ~ 3724452 (-) |
| G214335 | NA | non-coding | downstream | 2408 | 3287303 ~ 3287650 (-) |
| G214282 | NA | non-coding | downstream | 45758 | 3237894 ~ 3244300 (-) |
| G214288 | NA | non-coding | downstream | 99001 | 3190855 ~ 3191057 (-) |
| G214279 | NA | non-coding | downstream | 116192 | 3173448 ~ 3173866 (-) |
| G214276 | NA | non-coding | downstream | 121053 | 3168694 ~ 3169005 (-) |
| G214317 | NA | non-coding | upstream | 26013 | 3317809 ~ 3319129 (-) |
| G214408 | NA | non-coding | upstream | 159552 | 3451348 ~ 3451945 (-) |
| G214413 | NA | non-coding | upstream | 172473 | 3464269 ~ 3469715 (-) |
| G214433 | NA | non-coding | upstream | 278020 | 3569816 ~ 3570646 (-) |
| G214434 | NA | non-coding | upstream | 286074 | 3577870 ~ 3580653 (-) |
| G214027 | NA | other | downstream | 717156 | 2557166 ~ 2572902 (-) |
| G214017 | NA | other | downstream | 825360 | 2462176 ~ 2464698 (-) |
| G213948 | NA | other | downstream | 958742 | 2328513 ~ 2331316 (-) |
| CI01000050_02230904_02233429 | NA | other | downstream | 1049169 | 2228865 ~ 2233429 (-) |
| G213704 | NA | other | downstream | 1972952 | 1312983 ~ 1317106 (-) |
| G214314 | NA | other | upstream | 121652 | 3413448 ~ 3424257 (-) |
| G214436 | NA | other | upstream | 234020 | 3525816 ~ 3589057 (-) |
| CI01000050_04564233_04580815 | KANSL3 | other | upstream | 1271891 | 4563687 ~ 4581278 (-) |
| G215935 | NA | other | upstream | 1757120 | 5048916 ~ 5073109 (-) |
