CI01000050_03635030_03637939


Basic Information

Item Value
gene id CI01000050_03635030_03637939
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3634573 ~ 3639160 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03635030_03637939.mRNA
ACAAAGCTATAGCCTACTTACATGGTTCTACATGTTGTCATGCAAGAACAAGATTGCGTCCACAGTTTCTGGTTTCAGAGCGGTCCTCCTCTGCGTCACGCGTGCGAGACTGCGAGTGCGAGTGGACGAGACGCTGCGCATGACACGTGACGTGCTTTATCAAGGGCCCGACCCGACCCTGCCCGAGGACGGTGGCGGGAAATATCGGGCAGAGAATCTAAGCTCTAGTCTGAATACTTTCCGTACCCACTGTATATAGTAGTCAACATTTGAAGTGGATCACAAAAGTTCATCAAAGTTGTCCTAAGAAGAAGGTTTTAGGATAACTTTGATAAAAGGTTTTGATCCACTTCAAATGTTGACTACTGCATAGTAATCAACACATGTAGTATTGTGGTATTATAGTGAACTAATAAACTGTAATAAATACTGTAATATACTTTAGTTTGTACTACAATACACTACAGTTTACTGTGCAGTTTAGGCTACTTACTACAGTTAAATATACCCTATAGTTGTAGAAAACTTAGTACAGTAATTTGTTTATGTTACTATAGTTGTTATATTACCACAGCAACTGTAGAATTACCACAACAAATTAATTCAAGTACTTTACTATAGTATGGTTAAAAAACATTATAGTATTTACTATAAATTACTATAGAATTTTTTCATGTTTTCTATATATATATATATATATAGAAATAACAAATAACAAATACATCTAATGCAAACATTTAAATGCTTTTAAAGGCGACATACATGGGGACGATGTATACTATGTATCAGGCATCTTATAATCTTATGTAAGGTTTATCTATTTAGTTACTTTCTGTTTGCTAGTATTGTTTAGCACCCTGATGAAGGCCTGTTTGGGCCGATACACGTTGGTGTCTTTTACTATGTAGCCCAGTCTTATAATAAAGGCTTTTTTACTCTTATGTGAGTGCCCATGTGGAATTCCCTAGAGAGAAAAAAAAAAAAAAAACTCCAGCGACACAGGTGTTAGTCATTATTTATTCACCCTATATGGTTATATGTCTCCTTCACCGGAAATACCAGCAGAAACGAACAAATCGAAAGTAGGAAGTTGAATTTGTATCACAGACAGTAAAATGTATAGCTTAAACTAGACCTAGCGGTGGGTTGCTGATCTTCAAATGAATGATTCTGTACTTTATTTTTGATTTTATATTTTCATTCATTTCCACGTGGTCCAGCATGGCTGTGCATGAAATCCTCCTACAGTGTTTGGATGAACTGGTCTCTGAGGAACTGGATTTATTTAAATGGTACTTAACTGTAGGCATAGACAGCTTCAAAATTCCCATAAGTCGATTGGAGAATAAATCAAGGTGTGAGGTTGTGGGATGTATGATTCAACATTATCTTTCTAATGGTGCTGGGAATCTCACTCTGCTCATTTTGGAAAAGATGAAGAAGATGGATCTTGCAGAAAAGCTGCGAAAGAATCTAGGTCATGGTATGGATACCCTGCAGTCCAAACATAATACTGAAGCTGGAACATCACAGAAACAAGAGGGATGCAAATCAGGTGCTGAGTTTGTGGACAAGCACAGGACAGAGTTGATCAGTGGGGTCTCACTGGTGGAGCCCATTGCAGATGACATGAAACCTCTGATTGGCGATGCAAAATACCAAATCGTCATAAAATCAGAAACACCTCAGGAACAAATGAGAAAGCTTCTGAACTTTTTGACCGTAGCTACACTGAAAGAGAAACTTTACCAAAGTCTTAAAAAACATGAGTCCTTCCTTGTTGAAGAATTGGAGCATTCTGGGTAGAGGGGTTTCATTTGGCTTATTGGCTGCGTTCCACTTTACATTTTTAGGCCCTTCACTCACTAACTTCCCTTCGCCTCGTGGACTCAGATGTGCGTCATTGCTTATGTTGCACGAGTGCCCACTGCTAGTGGAACTCGTGCATAAGGTTTAAATGAAACGCACTAAGCCCTTGATCACTTAGAATTCACTATGGAGCTGATTTATTATTTAAACCTCTTTTGTACTTATGAATTTGTTTTATGCAACATTCTATATGCTTAGAAGTTGTTGGAGAAAATATATAAAATCCTATAGGTATATGAGCTTTTGAAGAAAAATAAAATTACACAAACGAAACAAAATATCAATAGTATATTTGCTTGTGAACAAGGTAGCTACAATTTTTATGCGATTAAATCTCAACATAATTAATGTATTTTACACTATTATGCGATTAATTCCCAAAATAATCAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03635030_03637939.mRNA True 2263 mRNA 0.37 3 3634573 3639160

Neighbor

gene id symbol gene type direction distance location
CI01000050_03491159_03514757 NA coding downstream 119816 3491088 ~ 3514757 (-)
CI01000050_03362364_03363241 NA coding downstream 270316 3362284 ~ 3364257 (-)
CI01000050_03142876_03156191 KLHL22 coding downstream 476009 3142811 ~ 3158564 (-)
CI01000050_02945824_02971282 GNA14, GNA14A coding downstream 663204 2944921 ~ 2971369 (-)
CI01000050_02785728_02797909 PHYHIP coding downstream 836664 2785556 ~ 2797909 (-)
CI01000050_03672005_03672822 NKX3-1 coding upstream 32746 3671906 ~ 3672888 (-)
CI01000050_03721951_03724091 NKX2.7 coding upstream 82637 3721797 ~ 3724452 (-)
CI01000050_03759473_03767344 STC1 coding upstream 120265 3759425 ~ 3767563 (-)
CI01000050_03776675_03777031 NA coding upstream 137424 3776584 ~ 3777215 (-)
CI01000050_03798634_03799395 NA coding upstream 159455 3798615 ~ 3799395 (-)
G214432 NA non-coding downstream 22493 3599224 ~ 3612080 (-)
G214435 NA non-coding downstream 25348 3603565 ~ 3609225 (-)
G214448 NA non-coding downstream 44319 3590027 ~ 3590254 (-)
G214434 NA non-coding downstream 53920 3577870 ~ 3580653 (-)
G214433 NA non-coding downstream 63927 3569816 ~ 3570646 (-)
G214473 NA non-coding upstream 15760 3654920 ~ 3655168 (-)
G214487 NA non-coding upstream 70941 3710101 ~ 3710420 (-)
G214521 NA non-coding upstream 78510 3717670 ~ 3717965 (-)
G214524 NA non-coding upstream 89437 3728597 ~ 3728812 (-)
G214529 NA non-coding upstream 112157 3751317 ~ 3751524 (-)
G214436 NA other downstream 45516 3525816 ~ 3589057 (-)
G214314 NA other downstream 210316 3413448 ~ 3424257 (-)
G214027 NA other downstream 1061671 2557166 ~ 2572902 (-)
G214017 NA other downstream 1169875 2462176 ~ 2464698 (-)
CI01000050_04564233_04580815 KANSL3 other upstream 924527 4563687 ~ 4581278 (-)
G215935 NA other upstream 1409756 5048916 ~ 5073109 (-)
G216093 NA other upstream 1850397 5489557 ~ 5552103 (-)
G216408 NA other upstream 2716857 6356017 ~ 6356511 (-)
G216931 NA other upstream 3524935 7164095 ~ 7165401 (-)

Expression


Co-expression Network