Gene
RNA
| Item | Value |
|---|---|
| gene id | G214990 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 3904382 ~ 3904593 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: extensin-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU243923 | True | 212 | lncRNA | 0.35 | 1 | 3904382 | 3904593 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_03798634_03799395 | NA | coding | downstream | 104987 | 3798615 ~ 3799395 (-) |
| CI01000050_03776675_03777031 | NA | coding | downstream | 127167 | 3776584 ~ 3777215 (-) |
| CI01000050_03759473_03767344 | STC1 | coding | downstream | 136819 | 3759425 ~ 3767563 (-) |
| CI01000050_03721951_03724091 | NKX2.7 | coding | downstream | 179930 | 3721797 ~ 3724452 (-) |
| CI01000050_03672005_03672822 | NKX3-1 | coding | downstream | 231494 | 3671906 ~ 3672888 (-) |
| CI01000050_03916668_03927175 | NA | coding | upstream | 9777 | 3914370 ~ 3927175 (-) |
| CI01000050_04208939_04225972 | ACSL2 | coding | upstream | 304346 | 4208939 ~ 4225972 (-) |
| CI01000050_04247305_04272766 | NA | coding | upstream | 342451 | 4247044 ~ 4272766 (-) |
| CI01000050_04291776_04301169 | RAB7A, RAB7 | coding | upstream | 387164 | 4291757 ~ 4301169 (-) |
| CI01000050_04442645_04542984 | BMP1A, BMP1 | coding | upstream | 537822 | 4442415 ~ 4543263 (-) |
| G214562 | NA | non-coding | downstream | 65608 | 3838547 ~ 3838774 (-) |
| G214560 | NA | non-coding | downstream | 69144 | 3834523 ~ 3835238 (-) |
| G214544 | NA | non-coding | downstream | 101276 | 3802535 ~ 3803106 (-) |
| G214534 | NA | non-coding | downstream | 147333 | 3756840 ~ 3757049 (-) |
| G214530 | NA | non-coding | downstream | 151114 | 3753047 ~ 3753268 (-) |
| G214991 | NA | non-coding | upstream | 220 | 3904813 ~ 3905070 (-) |
| G215018 | NA | non-coding | upstream | 60747 | 3965340 ~ 3965569 (-) |
| G215019 | NA | non-coding | upstream | 61078 | 3965671 ~ 3965988 (-) |
| G215020 | NA | non-coding | upstream | 63475 | 3968068 ~ 3968279 (-) |
| G215031 | NA | non-coding | upstream | 83964 | 3988557 ~ 3989798 (-) |
| G214436 | NA | other | downstream | 315325 | 3525816 ~ 3589057 (-) |
| CI01000050_03491159_03514757 | NA | other | downstream | 393591 | 3491088 ~ 3514757 (-) |
| G214314 | NA | other | downstream | 480125 | 3413448 ~ 3424257 (-) |
| G214027 | NA | other | downstream | 1331480 | 2557166 ~ 2572902 (-) |
| G214017 | NA | other | downstream | 1439684 | 2462176 ~ 2464698 (-) |
| CI01000050_04564233_04580815 | KANSL3 | other | upstream | 659094 | 4563687 ~ 4581278 (-) |
| G215935 | NA | other | upstream | 1144323 | 5048916 ~ 5073109 (-) |
| G216093 | NA | other | upstream | 1584964 | 5489557 ~ 5552103 (-) |
| G216408 | NA | other | upstream | 2451424 | 6356017 ~ 6356511 (-) |
| G216931 | NA | other | upstream | 3259502 | 7164095 ~ 7165401 (-) |
