fgf14 (fgf14)


Basic Information

Item Value
gene id fgf14
gene name fgf14
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 34550426 ~ 34759577 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680631.1
GAGGAGTTAGGCGTTGAGACTTGTTGATGCCGGAGATGAATTGATTTGTGGGTCGAGACGGAGAAGCTCGTGCCTTTTTTACCCCAACCACCCACCCACAAACCCTCCCCTCTCTCATAGCACCCCCACCCCCGcccacccctcacacacacgcacacacacacttctgtgaGCGCGCGAGTTACAGATGCAAACTAGTCTCGTGCACAGAGGTcgagcttttgttttttttaaagagctttcTTGAACCTGAGCggttctgttttgtgttttgacaAACAAAGCCGACAGTGATCATCGCGCGCGGATGCGCAGGTCGCGATTCGCTTTTTTTTGGACGATTTTTTGGACGAGTGGCGGCAGCTCGGAGTTTATGCATTTGTTTTCTAACACCAGACGGACGTCGGCTTCTTTTCTCGCTACCGATCGCTCctatttacttaatttcttgATTTCTTGATCTCTTTATTTCATCGGCTGGTATGCGCTTGGGATTGGCGAACGTCAAGAagagaaaaataatgaaataatgcaaGTCGTTTGTGAAAGTCAGGCTGAGAGCAGTCATGAAGGTTTACGAGGACCGCTTGAACGTACGCACGGGGAAGAGTGTGGGTATACAGAAGAAGACAGCGCGAGCCCTTCGTTAAAACTTCACGCATCGGCGCGTCGGGGTCGCATTTGTGGTTGTGGTCGCGCCTAGCGATCATCAGCGATCATCACAATATTCATCACCTATCATCCCACTCATCACCGTCAAACTGTGGATAACTACCTGTGTGGGATACGCtttcttctgttctgttctgtttttcttttaagaacGTGATGCAGCTGAACTATATGAAAtatgtgaaagagaaagagatagaaagagagatagaaggagAGATAGACTCGTCTTCGCAGACGTGGCAAAGCTCCACCTGAGCGAAGGTGGACAGGTTTTTTTTCCACCCgcgggaaaaaaacaaataaataaataaaacgcgAAAACGCGAAGTGAACGGCGTGGTCGCAGCCGCTATCCGCGGTTCTGAAAATCAATCCGACATCTGAGCGGCCGCTGTTCGCTATCCGCGGTTCTGAAACAACCATCGGCAACACCAGCAAAACACCAGAACAGGAAAGTTCCCGACACATCAGACAGACGTGGGTGAATCCACCAACTGACACCACACCAGTGCCATCAATCCAATAAGGGATTTAGCCTgggaaaaaaaggcaaaaaaaaacacgaatGCAGGTATGATAAGCCAACCAACCCACCAACCCGCATGAATTGCAGAGCAGATGTTTTGGAATCAGGCTGAGCCCTGAGGACAGCATGATGAATCCCTAACCTCTCAGCTGTATCTGTGCATTAATTATGTCCATCCTGTGTCTTCTGCTACCGATTGTCACATCTGGACGCTGTTCTTGAATAGCATCAATTTAAGACAGCAGAACGGAGGCAAATATGGGACAGTGACCGAGGCTGAAGGAGGTGGTGGTTGTCGCCTTTGCTTGGCGTAAGACATAAAAACAGTCCTTCGCTCTCTTCTCGATATTTGGGAGACATGGCAGCTGCGATTGCCAGCGGTTTGATCCGACAGAAGAGGCAGGCGAGGGAGCAGCACTTAGACAGACCCTCCACCAACCGCAGGAGGAAAAGTCCGAACAAGAACAAAGGTCTTTGCAATGGCAATCTAGTGGACATCTTCTCCAAAGTGCGAATCTTCGGCCTTAGGAAGAGGAGACTTCGAAGACAAGATCCCCAGCTCAAGGGTATAGTGACCAGGTTATATTGCAGGCAGGGATACTACTTGCAAATGAACCCAGATGGATCTCTTGATGGGACCAAGGATGACAGCAGTAATTCCTCATTGTTCAATCTCATCCCTGTGGGCCTCCGAGTTGTTGCTATTCAGTCCGTGAAGACAGGGTTATACATCGCCATGAATGGGGAAGGCCATCTGTACACATCAGAACTCTTTACGGCGGAGTGCAAGTTTAAAGAGTCTGTATTTGAGAACTACTACGTGATCTACTCGTCCATGTTGTACAGACAGCAGGAGTCAGGGAGAGCCTGGTTTCTGGGCCTCAATAAAGAGGGCCAGGCCATGAAGGGCAACCGTGTGAAGAAAACCAAACCAGCTGCTCACTTCCTGCCCAAGCCATTAGAAGTCGCGATGTACCGGGAGCCATCGTTGCACGACGTCGGGGAGTCAGTGCCCAAGGCCGCCGTGCCTCCGAGTAAAAGCACAAACGAGCCGGCCGTGATGAACGGAGGCAAACCAGTCAGCAAGCCCGCCAGCAAGCCCAGCACATAGCCCGGCCGCGGAGACCACGCCAGAGACCCCCCTGCCCccggagagagagcgagactcTCCCTGTCTCGTCTGTGGATCCGGTCCAGACGAGcccctcttctcctcctccagctcctcctcttccttctccttcttcctcttccttcttcctcttcttctccagcgcctcctcctccttctcctcctcctctgacTCTTTTCCTCCACTCGGCAGATCGATCGCAGAAGCCGCGGCCAAGAGTAGCGCTGAGGAGGAGGATCCGACCGGACGCAGCGGCGGATCAACCCGCAACCatggaatgaatgaataaataaatgaatgaataaatgctctacCGGATACGGAATGCCTTTTTTCCTGCTTCCCTAGAAAACACAATAAACTCCCACcctctattttatttttgttccttATGACTGTGACAATCTATGAAAGACTGAAAGACTTTAAGACTGAAAGACTGAAGGACTGAGAGGGACAGCAGCTGCAGGTGCATCGTGTGATGACGTCTCTatccttcttcttcttattctcCTTCTTATAATTACTATAattcttattttgtcttttttttttttagttgtttgtgttttttggagcCCTGTGATGGCGGTGTCTATTTCAGATCTATTTTCTATACACAGTGAACACCAGCTACGCTCTGGGGAAATAATGCGCATTGACTACAGACGGACTTCTGCGAGAAACTGCAAGAAAAACACAGGACTGTCGTCGCTGTCCTCAGATTTTTTTATAGGGTCTGTTTCTCCTCCAGTGTCTCCTGCTCGATCTTATCAagctttctcttctctctctgtgtgtctctgtctctatcgTTCTTTCTcattcctttttgttttttcgtCGAGTTGTTCTACAGCACTACAGCAGGGGatatgtgtgatttttttatttattcatttatttattttttagttaatttggttCGTCTCTTTCCTTTTTCTACTACTTTCtactactttcactttcattttgCATTTTGAGTGCACACATCTTAACAGTTCTTTTGGTGCACCCCTAcacttatatatacatatatatatatatatatatatatagtatatatata
>XM_022680632.1
ttttttaatttcttcattcctttttttctttttcttcttttttaatgttgttgctgctgttgctgctgctgcgcgAGCCACCACGAGCGTCCTGAAACCGATcgagagtgagtgaataataagtgagtgtgtgtgcgtgtgtgtatgtgcgtgtgtataCAGCCAGCCcggtgtagagagagaaagagccacGTGAGCGCGTGAGGAGAGCACCGCGGACGGAGGGACGGACCGGGCGCACGCTTTTCCGTCGGCTGGCTCGCTCGACGCGCGCGCCTTCGCGCTCTTCTATGACTCTCTCGCGTCCGCTGACCGGAGAACACAGAGCCGCCGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCTCGCGCAGCCAGCTTTGGTCGGGGTCTGCGTTCCCGCTGCCGCCGCCGCTTTGATCCCCATcactatttttattgttattattactattattatgcaACCGAGAGGGTCTCCTCGGCTCTAGCAGGGTCTCTAAGAGAGAACAGACAAGAAGCTGCCGCCGCCGGACCTTgccgctcctcctcctcctcgcccCAAATCAAATGTGGTTTCTGTGGAACATCTTCAGCAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAAGAGTCTCAAGAAAAGCAAGAACCCCAGTGATCCCCAGCTCAAGGGTATAGTGACCAGGTTATATTGCAGGCAGGGATACTACTTGCAAATGAACCCAGATGGATCTCTTGATGGGACCAAGGATGACAGCAGTAATTCCTCATTGTTCAATCTCATCCCTGTGGGCCTCCGAGTTGTTGCTATTCAGTCCGTGAAGACAGGGTTATACATCGCCATGAATGGGGAAGGCCATCTGTACACATCAGAACTCTTTACGGCGGAGTGCAAGTTTAAAGAGTCTGTATTTGAGAACTACTACGTGATCTACTCGTCCATGTTGTACAGACAGCAGGAGTCAGGGAGAGCCTGGTTTCTGGGCCTCAATAAAGAGGGCCAGGCCATGAAGGGCAACCGTGTGAAGAAAACCAAACCAGCTGCTCACTTCCTGCCCAAGCCATTAGAAGTCGCGATGTACCGGGAGCCATCGTTGCACGACGTCGGGGAGTCAGTGCCCAAGGCCGCCGTGCCTCCGAGTAAAAGCACAAACGAGCCGGCCGTGATGAACGGAGGCAAACCAGTCAGCAAGCCCGCCAGCAAGCCCAGCACATAGCCCGGCCGCGGAGACCACGCCAGAGACCCCCCTGCCCccggagagagagcgagactcTCCCTGTCTCGTCTGTGGATCCGGTCCAGACGAGcccctcttctcctcctccagctcctcctcttccttctccttcttcctcttccttcttcctcttcttctccagcgcctcctcctccttctcctcctcctctgacTCTTTTCCTCCACTCGGCAGATCGATCGCAGAAGCCGCGGCCAAGAGTAGCGCTGAGGAGGAGGATCCGACCGGACGCAGCGGCGGATCAACCCGCAACCatggaatgaatgaataaataaatgaatgaataaatgctctacCGGATACGGAATGCCTTTTTTCCTGCTTCCCTAGAAAACACAATAAACTCCCACcctctattttatttttgttccttATGACTGTGACAATCTATGAAAGACTGAAAGACTTTAAGACTGAAAGACTGAAGGACTGAGAGGGACAGCAGCTGCAGGTGCATCGTGTGATGACGTCTCTatccttcttcttcttattctcCTTCTTATAATTACTATAattcttattttgtcttttttttttttagttgtttgtgttttttggagcCCTGTGATGGCGGTGTCTATTTCAGATCTATTTTCTATACACAGTGAACACCAGCTACGCTCTGGGGAAATAATGCGCATTGACTACAGACGGACTTCTGCGAGAAACTGCAAGAAAAACACAGGACTGTCGTCGCTGTCCTCAGATTTTTTTATAGGGTCTGTTTCTCCTCCAGTGTCTCCTGCTCGATCTTATCAagctttctcttctctctctgtgtgtctctgtctctatcgTTCTTTCTcattcctttttgttttttcgtCGAGTTGTTCTACAGCACTACAGCAGGGGatatgtgtgatttttttatttattcatttatttattttttagttaatttggttCGTCTCTTTCCTTTTTCTACTACTTTCtactactttcactttcattttgCATTTTGAGTGCACACATCTTAACAGTTCTTTTGGTGCACCCCTAcacttatatatacatatatatatatatatatatatatagtatatatata
>XM_022680633.1
TCGTCCAGGCCTGTGACAACCAAACCAGCAACAATAGAACGTGTGCTTAAGCACTTGACATTTCTGGGAGGCTATCATTATCCAGTAGCGCACTGGCGCTCGCCGAAGGGCACCGGCGCTGCTGTAAGAGGTGGGCTTTTCAAGAGGCTCTGAAGGGCTTCTTAAGGGTGGCCAAGCTCTGAGAGCTGGCAGTCCAGCGCCCGTGGTGGAGGTTAGCGGGGAGGGTCCATGAAAAAGGTCGGACTATGGAGCACACTGGCTTCGTAAAGATTGTAGAGCGGCATTTACGCACCGCAATCAAAAACACTGACCGAGAGGATCCCCAGCTCAAGGGTATAGTGACCAGGTTATATTGCAGGCAGGGATACTACTTGCAAATGAACCCAGATGGATCTCTTGATGGGACCAAGGATGACAGCAGTAATTCCTCATTGTTCAATCTCATCCCTGTGGGCCTCCGAGTTGTTGCTATTCAGTCCGTGAAGACAGGGTTATACATCGCCATGAATGGGGAAGGCCATCTGTACACATCAGAACTCTTTACGGCGGAGTGCAAGTTTAAAGAGTCTGTATTTGAGAACTACTACGTGATCTACTCGTCCATGTTGTACAGACAGCAGGAGTCAGGGAGAGCCTGGTTTCTGGGCCTCAATAAAGAGGGCCAGGCCATGAAGGGCAACCGTGTGAAGAAAACCAAACCAGCTGCTCACTTCCTGCCCAAGCCATTAGAAGTCGCGATGTACCGGGAGCCATCGTTGCACGACGTCGGGGAGTCAGTGCCCAAGGCCGCCGTGCCTCCGAGTAAAAGCACAAACGAGCCGGCCGTGATGAACGGAGGCAAACCAGTCAGCAAGCCCGCCAGCAAGCCCAGCACATAGCCCGGCCGCGGAGACCACGCCAGAGACCCCCCTGCCCccggagagagagcgagactcTCCCTGTCTCGTCTGTGGATCCGGTCCAGACGAGcccctcttctcctcctccagctcctcctcttccttctccttcttcctcttccttcttcctcttcttctccagcgcctcctcctccttctcctcctcctctgacTCTTTTCCTCCACTCGGCAGATCGATCGCAGAAGCCGCGGCCAAGAGTAGCGCTGAGGAGGAGGATCCGACCGGACGCAGCGGCGGATCAACCCGCAACCatggaatgaatgaataaataaatgaatgaataaatgctctacCGGATACGGAATGCCTTTTTTCCTGCTTCCCTAGAAAACACAATAAACTCCCACcctctattttatttttgttccttATGACTGTGACAATCTATGAAAGACTGAAAGACTTTAAGACTGAAAGACTGAAGGACTGAGAGGGACAGCAGCTGCAGGTGCATCGTGTGATGACGTCTCTatccttcttcttcttattctcCTTCTTATAATTACTATAattcttattttgtcttttttttttttagttgtttgtgttttttggagcCCTGTGATGGCGGTGTCTATTTCAGATCTATTTTCTATACACAGTGAACACCAGCTACGCTCTGGGGAAATAATGCGCATTGACTACAGACGGACTTCTGCGAGAAACTGCAAGAAAAACACAGGACTGTCGTCGCTGTCCTCAGATTTTTTTATAGGGTCTGTTTCTCCTCCAGTGTCTCCTGCTCGATCTTATCAagctttctcttctctctctgtgtgtctctgtctctatcgTTCTTTCTcattcctttttgttttttcgtCGAGTTGTTCTACAGCACTACAGCAGGGGatatgtgtgatttttttatttattcatttatttattttttagttaatttggttCGTCTCTTTCCTTTTTCTACTACTTTCtactactttcactttcattttgCATTTTGAGTGCACACATCTTAACAGTTCTTTTGGTGCACCCCTAcacttatatatacatatatatatatatatatatatatagtatatatata

Function

symbol description
fgf14 Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to act upstream of or within nervous system development. Predicted to be located in extracellular region. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 27. Orthologous to human FGF14 (fibroblast growth factor 14).

NR:

description
fibroblast growth factor 14-like isoform X1

GO:

id name namespace
GO:0007399 nervous system development biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K23920 FGF14, FHF4; fibroblast growth factor 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680631.1 True 3403 mRNA 0.48 5 34550426 34626698
XM_022680632.1 False 2307 mRNA 0.49 5 34550426 34759577
XM_022680633.1 False 1969 mRNA 0.48 5 34550426 34728940

Neighbor

gene id symbol gene type direction distance location
nalcn nalcn coding downstream 105187 34323173 ~ 34445239 (-)
zic5 zic5 coding downstream 523588 34021969 ~ 34026838 (-)
LOC103047371 LOC103047371 coding downstream 675121 33870988 ~ 33875305 (-)
gpr183 LOC103047691,LOC108426030,LOC107740920,LOC107668870,LOC107569509,LOC107600423,LOC107681323,LOC107748620 coding downstream 708811 33838702 ~ 33841615 (-)
gpr18 gpr18,LOC107748622,LOC107681324,LOC107600424,LOC107570094 coding downstream 727372 33820164 ~ 33823054 (-)
LOC111194948 NA coding upstream 53850 34813427 ~ 34815919 (-)
LOC111194949 NA coding upstream 59519 34819096 ~ 34821789 (-)
ankrd44 ankrd44,LOC107719801,LOC107595853,LOC107659898 coding upstream 80798 34840375 ~ 34878649 (-)
sf3b1 sf3b1,LOC107731751,LOC100380860,LOC107690614 coding upstream 120928 34880505 ~ 34896212 (-)
hspd1 hspd1,LOC107690611,LOC107569661 coding upstream 150584 34910161 ~ 34920697 (-)
G171768 NA non-coding downstream 382780 34167387 ~ 34167646 (-)
G171732 NA non-coding downstream 486931 34063152 ~ 34063495 (-)
G171716 NA non-coding downstream 545554 34002667 ~ 34004872 (-)
LOC111194945 NA non-coding downstream 644390 33901546 ~ 33906036 (-)
G171659 NA non-coding downstream 716340 33833826 ~ 33834086 (-)
G172007 NA non-coding upstream 26062 34785639 ~ 34785893 (-)
G172019 NA non-coding upstream 53689 34813266 ~ 34819641 (-)
G172027 NA non-coding upstream 74146 34833723 ~ 34834376 (-)
G171995 NA non-coding upstream 75480 34835057 ~ 34835412 (-)
G172032 coq10b,LOC107569649,LOC107690612,LOC107731759,LOC107659895,LOC107719803 non-coding upstream 138632 34898209 ~ 34908956 (-)
tmtc4 tmtc4,LOC107600375,LOC107748611,LOC107681320,LOC107569561 other downstream 276637 34255377 ~ 34273789 (-)
LOC103024438 LOC108426008 other downstream 1232075 33307993 ~ 33318351 (-)
LOC103028031 LOC108426040 other downstream 1314548 33214322 ~ 33235878 (-)
G171553 NA other downstream 1374142 33174053 ~ 33176284 (-)
ndp ndp,LOC107748154,LOC107756747,LOC107695497 other downstream 1774408 32758507 ~ 32776018 (-)
rftn2 rftn2,LOC107595849,LOC107719806,LOC107659885,LOC107690607 other upstream 173435 34933012 ~ 34959753 (-)
G172060 NA other upstream 462138 35221715 ~ 35222225 (-)
dnajb11 dnajb11,LOC107731764,LOC107690604,LOC107659888,LOC107595843,LOC107719809 other upstream 474630 35234207 ~ 35299796 (-)
olig2 olig2,olig3,LOC107731746,LOC107719825,LOC107659900,LOC107690629,LOC107569749 other upstream 609806 35369383 ~ 35371404 (-)

Expression


Co-expression Network