RNA id: XM_043258647.1


Basic Information

Item Value
RNA id XM_043258647.1
length 6778
RNA type mRNA
GC content 0.53
exon number 56
gene id dock10
representative False

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 7160336 ~ 7233359 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAAAGTTCTGCTTCTCTCGCTAAAGTCGACTCTCTCGTATCggcgcgtgtgtgcgtgcggaCCTGCGCTTCATTATGAGTTTTAGGAGTAAAATCACTTTTCGGAAGAAGATGAAAAGCAGACGCATGCGGGCGGACTGCAACCGAGTGAGCTGTCAGGAGAAGCCCAAACTGATCGACCCTCTGGACTACGAGGCTGTGGTTTCAGAGCTCGAACCTGAGCTCAGAGAAGACCCTCTTCAAGATCTCCTGCTCTTCCCAGACCTGGACTTCACCGTGTCCACTCTTCCCGTGGAGCAGAGAACGCTGAGGTCCACTGTGCCCGAGGGAGCCGACACACACGCTGAATGTCTGCTGGTCAGACAGgCCTGTCAATATTATAACTCCCAGCTGCATGTGATCCAGTATAAATATGAAGAGTATGCCGGGGACTACCGCACGCTGCCCAGGAAGCtgtataaatcagagaagttgcCCTCGCACTCATTTGAGATCGACCATGAAGATGTGGACAAAGATGAGgacaCAACGTCCCTGTCGTCGTCTAaaggtggaggaggtggagcaGGTAGTGGAGGTGCAGGGGGGATCGGGGTGTTTAAGTCCGGCTGGCTCTATAAAGGCAACTTTAACAGCACGGTCAACAACAGCATCACTGTCCGGTCCTTCAAGCGAAGATATTTCCAGCTGACTCAGCTGACTGACAACTCTTACATCATGAACTTCTACAAAGACGAGAAAATATCAAAGGAACCCAAAGGCTGTATATTCCTGGACTCGTGCACCGGGGTGGTTCAGAATAACCGGCTGAGGAAACACGCCTTTGAGCTGAAGATGAACGAGGTGACTTATTTCGTCCTGGCTGCCGAGAACGAGCAGGACATGGACGACTGGATCAACACTCTGACACGCATCCTGCAGATCAGTCCTCCGGACGGCCCGGCTCTCGATCGCAAGAGCACAGACCTGAGCGACAGCAAACAAGagATCATTGATGCGTCGTTGAATCCTGTCCCTGTTCAGCAACACGAGGAAACAACGGAAAACGGAATCCACCCCGAGCTGGCCAAGTATATTTCAGAGACAGAGGAATCAGCGAGAGCTGGCCGGGGAGACGAGAGACTGAACCTGTTCTCCCTGGATCCTGACATCCCCGTTTTGAGGAGCTCCAGGACGGAGTTTGGAGAGTCTGCCTCTGTCCAGCCGTTCGACGAGAAGCTCGGGAAGAGGCTGATGATCTCGTGCCGCTCGCTCAACCTCACGCTGCAGGGCTGCATCAACGAGACCGACTCCGAGCCCGTGACTAACATCGAGCCTTTCTTCGTATCGGTTGCTCTGCTGGACATTCGCGAGGGCAGGAAGGTCTCCGCTGACTTCCACGTGGACTTGAACCACGAGGTGGTGCGGCAGATGCTCAGCAGCTCTTCCGGTGCGGGAGATCAAGGGTCTGACGGCGCTCCGCTGGAGAATGGCCTGAGCTCGACTGAGGAGAAGAAGAGCGAGGACTGCCAGCTGAGCTCGGAGCTGGAGAACTGGCTGAGCTTCCCCAGACAGGCCATTTTTTCCATTACGAACCCACATACGGACATCGTGATGGTGGCACGGGTGGAGAAAGTGTTGATGGGAAATATTTCCAGTGGTGCAGAACCCTacatcaaaaacacagattccaGCAAGACTGTCCAAAAGATGTTAAAATCCAATAAGCAATTCTGTAGCAAACTTGGAAAGTACCGCATGCCTTTTGCCTGGTCTGTAAGGTCAGTATTCAAGGACAACCAGGGCACAATAGACAGGGAAAGCCGCTTCTCTCCGCTCTTCAAACAGGAGAGCAACAAGATTTCCACTGAAGACCTCATCAAGCTCATCACGGAGTACAGGAGgGCAGAGAAGGCCAGCAAACTTCAGATCATCCCTGGAAACCTTGAGATAAACGTGGACTGTGTTCCCATGGAATGTCCCAACTGTGTGACCTCCTCGTATGTGGCTCTGAGGCCCTTCGAGGACTGCGGTCTTCACGCGGCCACGGTCGAGGTGGACGAGTTCCTGCAGGACTCCTCCAAGTTTGCCCAGCCTTACAGAGTCTACAGGAATCACATGTACATCTACCCCAAACACCTCAAGTACGACAGCCAGAAGAGCTTCGCGAAGGCCCGAAACATCGCCGTTTACGTGGAGTTCAGAAGCTCCGATGAAGAACATGCCAAGCCACTTAAGTGCATCTACGGAAAGCCAGGAGGTCCTGTTTTTACCACGACTGCCTGCTCCACGGTTCTGCATCACTCACAGAACCCAGACTTTTACGATGAGGTGAAGATCGAGCTGCCCACGCATCTCCATGAGAAGCACCATTTGCTTTTCTCCTTCTATCACGTGACCTGTGACATCAATGCCAAGACCAGCTCCAAGAAGAAAGAGGCTCTCGAGACGCCAGtggGGTACGCATGGCTGCCTCTTCTGAAGGATGGACGTGTTTCCTCTCAGGATTTCAGTATTTCAGTCTCTTGCTCTTTGCCTGGTGGATATCTACACATCAAAGAGCCTTCATCCACCAAAaaTGGCTCTGATGTGAAGTGGGTCGATGGCGGGAAGCCCGTCTTCAGAGTGTCTACTTCGGTGCTTTCTACAGTTTATACTCAGgaCCCCCATCTAAACCGGTTCTTTCAGCAGTGCCAAAAACGAGAGGCGGACCTCTCTCAACCTCCTACCTCAAACTTTCTCAACTGCCTTAAAGGCCTCTTGAGCATGGAGAGGATTCACGTGATAATTCGCTTCCTCCCTGTTATATTCAACCAGCTCTTTAAAGTGCTCACTCAGAACGACACCGATGAAGTGTCCACCAGCACCACCAGGGTCCTGGTGCACATCTTAGCCAAGTGCCACGAGGAGAACCTGGCCCACTATTTGCACTCTTACATAAAGTTTGTCTTTAAGACTGAAGCTTGTGGCTTCAGGACGGTTCACGAAGAGTTGGCCAAGggcatgacctctgacctgaaGAGCAACGACCAGTCGGTCATACGCAATATCCTGAAGTTCTCCTGGTTCTTTCTGGAGATCATCGTGAAGTCGATGGCGCAGCATCTGCTGGACTCAAACAAGCTTAAGCTTCCTCGACCGCAGCGGTTTCCTGGCACTTTCCAAAGTCGGCTGGAGACCCTGATCATGACGATGTCCGATCACATCTACTGGAAGAATAAAGAGATGGCAGAGGAGACGCGCAGCGCTAACATGGCCATAGCGGGCTTTGTGAAGCGGTGCTTCACAGTCATGGACAGAGGTTTCACCTTCAAGCTGATCAGCAACTACATAAACATGATCACAGCCAGCGACAACAAGACGCTGTGTGAGCTGAAGTTTGAGTTTATAAGGGAGGTGTGTAACTATGAGCACTATGTCCCTCTGAGTCTTCCCATCCCGTCTGCACGAATCACAGACAAGGCATTGCTGGAAACCCAAAGTGCTCAGGTGGACTTTCCGGAGTATATTTTGACGGAGGAGTTCTGCAGGAAGCATTTTCTGACAGGATTGTTGTTGAGAGAGCTGGGGCTGGCTTTACAGGACGAGCAGGACCTGAGACACCTGGCCCTGGCCTGCCTGAAGAACCTCATGGCTAAACATTCACTGGACTCCCGTTATGCCATGAAGgagaaACAGGCACGGATAGCCTCTCTGTACCTGCCACTTTACGGCCTGATCCTTGACAACATGCCTCGCTTTTTCCTCAGAGATCTGTTTCCAATCTGCCTGACGACCAGCAACCAGGGTTCCAGAGATGATCTCAGTGTCGGAGTGAGTCTAGCTGGTCAGGTGACTCATGTTTTACGGCACGGGAACTCGATGGACGCGTCCTTCTCAAAGGAAGTGCTCAACTCCATCACAGCCTTTTCTTCGTTGGCCGTATCAACAGCTAACAACGCTGACTCCAGGGGCTCCCTCATCAGCATCGAGTCCAACCCCAGCAACGGTGACCGCAACAGTGAGAAGATGGATGCGTGTGAAAAGTTTGCCAGGCCACAGTCTCTCATCGGGTTTGGTTCACGCTTTGACAAACTGGATCAAGCGGAGACCAGAAGTCTGCTCATATGTTTCCTGCACATCATGAAGACCATTTCAGAGGAGGTGCTGGTGTCTTACTGGAATCGAGCCATTCATCAGGAGATCAGCGATTTCTTCAACATCCTGGAactGTGTCTCCAGCACTTCCGGTTCCTTGGAAAGCGTCACATTGCCAGGAAGCTAGCGGCCGCCGTAAAGCTGGCTCAGGCCACACAGAACAATGGCACCCTGAAGGGCTCTAACGTGTCCTGCCAGTCTTCAGGGCTCCTACCCCAATGGATGCTCTCTGCTCAGGACGGGCACAGACACGCTCGCTCACAGACCATGCCCATCATCAGGGGGAAGAACGCCCTCACTAACCCCAAACTGCTGCACATGATGGAGACCACGGacggAAACGTGTCTGAAGGAGAGGTCAGCACTACGGATATTGAAGCCAATCTTTCTACTGAAGTAGCACTGACCGTGTTAGATGTTCTGGATCTGTTTGTTCATCATCACAAGAAACGCTTGCAGCACGACGACGGCCAAAACTCTCTGATGAAGAAGGTGTTGGACACGTACCTGCTGTTCTTCCAGATCAACCAGTCCACCAGCTCCCTCAGACACGTCTTCACCGCCCTGCGCCTCTTCATTCACAAGTTCCCGTCCACGTTTTTCCAGGGCAAAGCGGATCTGTGTGGTACTCTGTGTTACGAGATCCTGAAGTGCTGTAACCATCGCTCCAGCTCCACTCAGACCGAAGCCGCCGCGCTGCTCTACTTCCTCATGAGGAGGAACTTCGAGTTCACGAAGGGCAAATGCATCGTCCGCTCTCACCTGCAGGTGATTAAATCTGTAAGTCAGCTGATCGCCGACGCAGGTATCGGAGGTTCTCGCTTCCAGCAGTCTCTGGCCATCATCAACAACTTCGCCAATGGAGATACACCGCTCAAAAGCACCACGTTCCCCGCTGAGGTGAAGGACCTGACCAAGAGGATCCGCACCGTCCTGATGGCCACGTCCCAAATGAAGGAGCACGAGAAGGACCCGGAGATGCTGGTGGACCTGCAGTACAGTCTGGCCAACTCCTACGCCAGCACACCCGAGCTCAGGCGCACGTGGCTGGAAAGCATGGCCAAGATCCACGTCAGGAACGGAGACCTGTCTGAGGCGGCCATGTGCTACATCCACATCTCAGCTCTTATAGCAGAGTCTCTGAGGAGGAGAGGTTACTGGAAGTCTGAGAAGGGTCGGATCTCAAGTGTGAGCAAAGAGGGAGCCTGTGTAATTAACTCTAGCCCCTTACTAACTCCCCAAGATGGAGAAAGTTCCTTCAGCATGGGCTGGGCCGCCTTCATGAACATCTCTCCTAATGTGAAGGAAGAGGGAGCGATGAAGGAGGACGCCGGCACCCAGGACACTCCGTACACTGAGGACACGCTGGTGGAGCAGCTGGAGATGTGTGTGGATTACCTCTGGAAGTCTGAGAGATACGAGCTCATCGCTGAGATCAACAAACCCGTCATAGCCGTCTTTGAGAAGAGGCGGGACTTCAAGcGGCTGTCAGAGCTGTACTACGACATTCACCGCTCGTACCTGAAGGTGACGGAGGTGGTGCACTCTGAGAAACGCCTGTTCGGACGTTACTATCGCGTGGCTTTCTACGGACAGGGCTTCTTTGAGGAAGAGGAGAGTAAGGAGTTTATCTATAAAGAGCCGAAGCTCACAGGACTCTCAGAGATTTCTCAAAGACTCCTCAAGCTCTACTCGGACAAGTTCGGAGCAGACAACGTCAAGATGATCCAAGACTCCAACAAGgtcAATCCTAAAGACCTGGACCCCAGATTTGCCTACATCCAGGTGACCTACGTAGTGCCTTATTTTAATGAGAAGGAACAGCTGGAGAAGAAGACCGACTTTGAGCGCCATCACAACGTCAATCGCTTCGTCTTCGAGACGCCCTTCACGCTTTCTGGGAAAAAACATGGAGACGTGGAGGAGCAGTGCAAAAGAAAAACCATCCTGACCACGAGCTCCAGCTTCCCCTTCCTGAAGAAGCGCATCGAGGTGGTGGAGCAGCAGAGCACCGAGATGAACCCCATCGAGGTGGCCATCGATGAGATGAGCCGGAAGGTGTCCGAGCTCAATCAGCTCTGCAGCATGGAGGAGGTGGACATGATCCGGCTGCAGCTCAAACTACAGGGCAGCGTCAGCGTCAAGGTAAACGCTGGGCCTATGGCTTACGCCCGAGCTTTCCTCGAGGAGAAGAACGCCAAGAAATACCCAGACAACCAAGTCAAACTCCTGAAGGAGATCTTCAGGCAGTTTGCAGACGCGTGTGGTCAGGCCTTGAAGGTGAACGAGCGTCTCATAAAAGAAGATCAGCTGGAGTATCAGGAGGAGATGAAAGCTCACTATAAAGACATGCTGAGCGAGCTGTCGGCCATCATGAACGAGCAGATCCCTTACGTGAGACAGCCCGGGACGGAGCGACACAGTGCCATCTGAGTCTGAGAGACCGCTCACGACTCGAGGCTTTCTGGGCGGAGCCTCTAAAGAACCTGGACTCGCTCGATGAAACAATAGAAATAgacaaaaaggaaaagaaatgtaGTGTTGTGGATGAAGCAGAATGCCGTATCTTTGCCTGtctaacagcacacacacacacacacacacgcacacacacacacacacacacgcacacacacacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153959 lncRNA downstream 62269 7042394 ~ 7098067 (-) False G104252
TU153961 lncRNA downstream 74804 7042394 ~ 7085532 (-) True G104252
TU154033 lncRNA downstream 121144 7037726 ~ 7039192 (-) True G104314
TU154011 lncRNA downstream 123506 6806292 ~ 7036830 (-) True G104294
TU154424 lncRNA upstream 277155 7490106 ~ 7490776 (-) True G104570
TU154431 lncRNA upstream 284035 7496986 ~ 7497259 (-) True G104572
TU154447 lncRNA upstream 297183 7510134 ~ 7513305 (-) True G104585
TU154452 lncRNA upstream 310875 7523826 ~ 7524108 (-) True G104589
TU154458 lncRNA upstream 333005 7545956 ~ 7547059 (-) True G104595
XM_043259207.1 mRNA downstream 9495 7128335 ~ 7150841 (-) True porb
XM_043259208.1 mRNA downstream 9611 7128335 ~ 7150725 (-) False porb
XM_043259210.1 mRNA downstream 9740 7128335 ~ 7150596 (-) False porb
XM_043259211.1 mRNA downstream 18736 7128335 ~ 7141600 (-) False porb
XM_043259215.1 mRNA downstream 34200 7120062 ~ 7126136 (-) True taf15
XM_043258900.1 mRNA upstream 162262 7375213 ~ 7382108 (-) False shox2
XM_043258899.1 mRNA upstream 162262 7375213 ~ 7382108 (-) True shox2
XM_043259445.1 mRNA upstream 322644 7535595 ~ 7538399 (-) True srprb
XM_043259766.1 mRNA upstream 361614 7574565 ~ 7575452 (-) True dnajc30b
XM_043258478.1 mRNA upstream 393939 7606890 ~ 7615046 (-) True otol1b
TU154060 other downstream 41050 7114426 ~ 7119286 (-) False mmp28
TU153584 other downstream 1013819 6146173 ~ 6146517 (-) True G104011
TU153427 other downstream 1410997 5744532 ~ 5749339 (-) False pgm2l1
TU153319 other downstream 1721389 5438048 ~ 5438947 (-) True G103825
TU152826 other downstream 3343594 3816062 ~ 3816742 (-) True G103449
TU154467 other upstream 356895 7569846 ~ 7572090 (-) True G104603
TU154509 other upstream 426693 7639644 ~ 7640339 (-) False G104628
TU154511 other upstream 426693 7639644 ~ 7640339 (-) False G104628
TU154597 other upstream 744885 7957836 ~ 7958231 (-) True G104695
XR_006252682.1 other upstream 831871 8044822 ~ 8050710 (-) False nipsnap2

Expression Profile