RNA id: XM_043218712.1


Basic Information

Item Value
RNA id XM_043218712.1
length 1438
RNA type mRNA
GC content 0.53
exon number 8
gene id tbc1d7
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25076488 ~ 25085331 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACACGAGGACGCGAACGACTTCCGGGGTCACGGGACTGCGGACAGCCGCGTTTGCAGATGTACGCGTTCTTTCTGAGAATTAAAGATGATAATATGCATTGAATGCGAATTGAAGTCAGATGTTTGACCGATAGAGCGTTTGAAGAGTCTCTCGGCTGAGAAAAACCGCTGAGGTCTGCCCCCTGagCTTCACATCGGCGATCATGGCTGATGATCCTCAGAGGAACTTTCGCTCGGCGTATTATGAGAAAGTGGGTTTCAGAGGAGTGGAGGAGAAGAAATCGCTTGAGATCCTGCTGAAGGACAATCCTCTGGATGTGGAGAAGCTGAGCACCTTCAGTCAGAGGTTTCCGCTGCCCTCCATGTACCGGATACACGTGTGGAAAGTCCTGCTGGGCATCCTGCCGCCCCACACGGACTCTCACGCGCTGGTGTCTCGCTATCGGCTCGAGCAGTTCGAGGACGTGAGCGGCGCTCTGACGGCCATGCGCTTCGTCCACGCCTCCACCCCGGCCACGGAGCTCTACCTGCGCATGTACCAGCTGGAGAGCAGACAGCTGCCCCGCAGGAGCGAGCTCAGGCCGCCGGTGAGGAGCTACGGGATTGATGATGAGGATGAAAACTTCCTGTCTATCAGCAGAGCGATGGAGGAGATCGTCGAGGACCCGGTCGACTGCTACTGGCTCGTCAGGTGCTTCGTCAACCAGTTCAAGATCAAGTTTGGAGACTCCGTCCCTCACCTGCCGAAGAGTTTGGAGCACTTCCTGTCTCAGGAGGACGCAGCTCTTCTGGCTCATCTGAAGGTGTCCGGCGCCCTGCACTCGCTGCCGTACTGTCTCTGGTTCAGACGCTGCTTCGCTGGCTGTTTACCCGAGTCCAGCCTGCAGAGGGTTTGGGATAAAGTCATCAGCGGCTCCTGTAAGATCCTGGTGTTTGTTGCCATGGAGATTCTGCTCAGCTATAAGATCATGCTGATGGGAATGAATGACCCGGATGGAGTTTACAACTTCCTGTCTAACATGCCGCAGGAGAACACGGACGCCATCGTCACTAAAGCCATCGACCTGTGGCACAAGCACTGCGGGACGCCCATGCACTCTGTCTAATTCATCCTCTCCAGCTGTGTTTGAGAAGCTGCGTACGTCATTCAGGACACGCCTCCCGCTCTCTGAGCCAATAGCAGCAGCGGAAGAGAGACCGGAAACAGAAACGCATCAATcttgcgtgcgtgcgtgtgtgtgtgtgtgtgtgcgtgcatgtgtcaTTTTACACccttatgtcgttccaaacctgtacgagtTCATATGTAAGATCAGGAAAAGTGCTTCAAGTCTCAAAaatcagggggaaaaaaaatggcatgtaGGCTTGGAACAAATGAAGGTGATAAAGTCagattttctatatatatatatatatatatatatatatatatata

Function

GO:

id name namespace
GO:0070848 response to growth factor biological_process
GO:0032007 negative regulation of TOR signaling biological_process

KEGG:

id description
K20396 TBC1D7; TBC1 domain family member 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209615 lncRNA downstream 6081 25068982 ~ 25070409 (-) True G141943
TU209575 lncRNA downstream 16569 25054807 ~ 25059921 (-) True G141920
TU209600 lncRNA downstream 24583 25046771 ~ 25051907 (-) True G141936
TU209597 lncRNA downstream 26767 25046771 ~ 25049723 (-) False G141936
TU209592 lncRNA downstream 34232 25039692 ~ 25042258 (-) True G141931
TU209631 lncRNA upstream 79907 25165238 ~ 25168599 (-) True G141951
TU209657 lncRNA upstream 133198 25218529 ~ 25305703 (-) False G141966
TU209659 lncRNA upstream 133198 25218529 ~ 25305703 (-) True G141966
TU209660 lncRNA upstream 133198 25218529 ~ 25305703 (-) False G141966
TU209658 lncRNA upstream 186211 25271542 ~ 25305703 (-) False G141966
XM_043220236.1 mRNA downstream 209312 24865459 ~ 24867178 (-) True c20h8orf82
XM_043220235.1 mRNA downstream 214650 24852469 ~ 24861840 (-) True naprt
XM_043220390.1 mRNA downstream 224711 24838652 ~ 24851779 (-) True rhpn1
XM_043218598.1 mRNA downstream 243500 24829849 ~ 24832990 (-) True hlx1
XM_043220220.1 mRNA downstream 355384 24699172 ~ 24721106 (-) True mia3
XM_043220384.1 mRNA upstream 839 25086170 ~ 25102714 (-) True wu:fi04e12
XM_043220552.1 mRNA upstream 18907 25104238 ~ 25116679 (-) True LOC122325515
XM_043218769.1 mRNA upstream 62811 25148142 ~ 25150522 (-) True psmg4
XM_043218770.1 mRNA upstream 62811 25148142 ~ 25150479 (-) False psmg4
XM_043220025.1 mRNA upstream 65881 25151212 ~ 25153120 (-) True bphl
TU209178 other downstream 224729 24847665 ~ 24851761 (-) False rhpn1
TU209125 other downstream 429069 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 545615 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 815454 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 1069825 24004687 ~ 24006665 (-) True G141502
TU209665 other upstream 243249 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 245595 25330926 ~ 25377416 (-) False wasf1
TU209689 other upstream 307789 25393120 ~ 25407942 (-) False mettl24
TU209680 other upstream 310877 25396208 ~ 25407942 (-) False mettl24
unassigned_transcript_2514 other upstream 548529 25633860 ~ 25633943 (-) True trnas-gcu_30

Expression Profile