RNA id: TU218386



Basic Information


Item Value
RNA id TU218386
length 475
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G147781
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18976688 ~ 18977162 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTTTCGCTGCTTCTCTCACGATGGCCTCAGATTCAAGAACACGGCCCTGAGAGAGAAGCCATCGTGGAGACTCTGGGATCAGCCTGAGGATTggtttacaagaaaaaaaacaggaaatggaGACAATCTACTGCTCTGTGTGCCTTAATTATAATGCAGCATAACAAAAACGTGCAGATTTTAACTTTCTGTTCTTTGATGTCAGAACTTTGTGAAACGTAGCATGGGCTTGTTTTTTCCGTGGGAATGCAAAGGGAAGTGTTTGGTGAGCGTAACTGAAGCCCTTCTGGTCTTCTGGAGACTTACCACCACAGAGGGATGTAGAGCACCGTCAGGCCCGACAGAACCCTCAGTAGTGTTCTCCAGTCTCGGACAAAGAAGGCCATCCACGGCAGCACCATGTAACCGATGCAGTAATGCAGACTCGCTCCCAGCGTCGTGAAGACAACACGCAAGGACTCGCTCAGCACTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218344 lncRNA downstream 1161 18974769 ~ 18975527 (-) True G147756
XR_006247438.1 lncRNA downstream 3693 18954879 ~ 18972995 (-) True LOC122326191
TU218343 lncRNA downstream 4712 18954884 ~ 18971976 (-) False LOC122326191
TU218339 lncRNA downstream 24806 18923823 ~ 18951882 (-) False acsl6
TU218363 lncRNA downstream 71026 18837831 ~ 18905662 (-) True G147765
TU218387 lncRNA upstream 1919 18979081 ~ 18979458 (-) True G147782
TU218389 lncRNA upstream 3912 18981074 ~ 18981562 (-) True G147784
TU218390 lncRNA upstream 4449 18981611 ~ 18982601 (-) True G147785
TU218394 lncRNA upstream 15129 18992291 ~ 18994844 (-) True G147786
TU218392 lncRNA upstream 17101 18994263 ~ 18994844 (-) False G147786
XM_043221743.1 mRNA downstream 30889 18923748 ~ 18945799 (-) True acsl6
XM_043221253.1 mRNA downstream 55407 18918501 ~ 18921281 (-) True LOC122326398
XM_043221286.1 mRNA downstream 99184 18873364 ~ 18877504 (-) False LOC122326420
XM_043221285.1 mRNA downstream 99185 18873367 ~ 18877503 (-) True LOC122326420
XM_043221284.1 mRNA downstream 157146 18817782 ~ 18819542 (-) True LOC122326419
XM_043220913.1 mRNA upstream 5828 18982990 ~ 18991517 (-) True sar1b
TU218329 other downstream 72215 18903531 ~ 18904473 (-) False G147749
TU218321 other downstream 72276 18903531 ~ 18904412 (-) False G147749
TU218335 other downstream 231550 18743184 ~ 18745138 (-) True G147751
TU218309 other downstream 267086 18707704 ~ 18709602 (-) True G147740
TU218295 other downstream 275626 18699622 ~ 18701062 (-) True G147728
TU218428 other upstream 48360 19025522 ~ 19103650 (-) True G147810
TU218399 other upstream 70184 19047346 ~ 19128737 (-) True G147791

Expression Profile