RNA id: TU218309



Basic Information


Item Value
RNA id TU218309
length 742
RNA type TUCP
GC content 0.56
exon number 2
gene id G147740
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18707704 ~ 18709602 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GACGACTTGAACCAGATGaagtattatttatgtttatctCGTCAGATGAATTCTGTCCTTCGCTGTCAGTTCAGCTCCGTCTGCTGCGCGCAGCTCTCAGTGCGCATGCGCGTTATCCTTTtgatttcttaatatttaatatcaatgGGTGACGCTGATTTCTAAAGCATCTCCTATAATTACGAAGAAAGCTTCGGCACGTTTCCCGAACGGCGAGGTGGACGTCGATCTCTTGTGTTTTATTCGACGAGCTTCGATCAGAATCAGTCAGAATTCATGCGAAGCACCAAAATGggacaaaaatgtcacatttaacccTTTCCTCTCCAGCGTCGACATTAACGCGAGAAGATGATGCGTCAGGGGCCCGGGGCCGGCAGTGATTTCTGTGTGGACAGCAGGCCGTCGTGTTTAGCCGAGGACGGGAGACTCTCGCCGAGTCACTTTGATTTGTGCCCCACCAAGTTCTATCAGTCTTCTCCTCCTCAGCGTCCCCGGCAGATGTGCTTCGCTTACCTGCCTCCTCCGGCCGTCCTCAAGCCCACGCCGTGCCGCGAGGAGCCGCCGATGTCCCCGGGGCCCGCCTCCGCCCAGGCCAGCGACAAGGCGGCAGCTCCAAGAAGAAGAGCGCGTCCGGGAGGTCTGGGAAGCGCGGCGTCCGGCGGGCACCACCAAATCAGCCGGATACAGAACCAGCACAGGCAGACCTCTGGGCACCACCAGGGCCGCCGGCTTCAAGACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218278 lncRNA downstream 102543 18604208 ~ 18605161 (-) True G147718
TU218274 lncRNA downstream 110307 18596085 ~ 18597397 (-) True G147714
TU218215 lncRNA downstream 238853 18381187 ~ 18468851 (-) False G147673
TU218206 lncRNA downstream 323810 18381187 ~ 18383894 (-) False G147673
TU218207 lncRNA downstream 339721 18357568 ~ 18367983 (-) False G147673
TU218310 lncRNA upstream 1050 18710652 ~ 18712050 (-) True G147741
TU218327 lncRNA upstream 26420 18736022 ~ 18902037 (-) False G147749
TU218331 lncRNA upstream 26420 18736022 ~ 18902037 (-) True G147749
TU218363 lncRNA upstream 128229 18837831 ~ 18905662 (-) True G147765
TU218366 lncRNA upstream 135394 18844996 ~ 18846410 (-) True G147767
XM_043220815.1 mRNA downstream 2619 18702021 ~ 18705085 (-) True LOC122326130
XM_043221681.1 mRNA downstream 84386 18617610 ~ 18623318 (-) True faxdc2
XM_043221940.1 mRNA downstream 111999 18591539 ~ 18595705 (-) True wdr55
XM_043221396.1 mRNA downstream 122263 18575504 ~ 18585441 (-) True cdc23
XM_043221403.1 mRNA downstream 142740 18560353 ~ 18564964 (-) True si:dkey-71d15.2
XM_043221738.1 mRNA upstream 21392 18730994 ~ 18735413 (-) False sap30l
XM_043221739.1 mRNA upstream 21392 18730994 ~ 18735411 (-) True sap30l
XM_043221252.1 mRNA upstream 41758 18751360 ~ 18918475 (-) True LOC122326397
XM_043221284.1 mRNA upstream 108180 18817782 ~ 18819542 (-) True LOC122326419
XM_043221286.1 mRNA upstream 163762 18873364 ~ 18877504 (-) False LOC122326420
TU218295 other downstream 6642 18699622 ~ 18701062 (-) True G147728
XR_006247482.1 other downstream 154960 18549531 ~ 18552744 (-) True rbm11
TU218205 other downstream 238853 18458374 ~ 18468851 (-) True G147673
TU217960 other downstream 537120 18170080 ~ 18170584 (-) True G147531
TU217955 other downstream 579705 18126229 ~ 18127999 (-) True G147526
TU218335 other upstream 33582 18743184 ~ 18745138 (-) True G147751
TU218321 other upstream 193929 18903531 ~ 18904412 (-) False G147749
TU218329 other upstream 193929 18903531 ~ 18904473 (-) False G147749
TU218428 other upstream 315920 19025522 ~ 19103650 (-) True G147810
TU218399 other upstream 337744 19047346 ~ 19128737 (-) True G147791

Expression Profile