RNA id: TU218363



Basic Information


Item Value
RNA id TU218363
length 552
lncRNA type read_through
GC content 0.43
exon number 2
gene id G147765
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18837831 ~ 18905662 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tttttttttttaTAGGAGCAGTGCCACAAGAACTGTATTTAGACAAATTATTccaaagaaaggaagaaaactAACATTACaatctacaaaaaaaagctatatagaGCAGATATACAGCAGTCATATAAAAGCGGGACATGTTTGTGTCACAGAGCAGACGAACACGAAAGAAACGAGGAAAGAAAACCTCAGACAGAATCTTCTCCGGTTCTTCAGCTTCAGAACGAGTGTGTGAAACGCTTCAGATCATTTGATACCAGAGAGAGCAAAGCTGCAGTCTTTCAGTCTCGCTCGTGCTTTCAATCAGGTCCTGGCTGGGTACATGGTGGAATCTGAACATGGGGTTATTGGTGTTACTGTGGGTTTggcacatcatcatcatcatcatcatcatcatcatcatcactacACAAGCGCGCGACTGTAGTGACTCCCGTAtgtacaaaaacacagcaagtATTCAGAGAGGAATCATAAAGCCAGCTAGCATCTGCACGTCATAAATAAAGAGCGCCGGCGGGAGAGGACGCTCATTCCACCTGCTTGCTCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218310 lncRNA downstream 125781 18710652 ~ 18712050 (-) True G147741
TU218278 lncRNA downstream 232670 18604208 ~ 18605161 (-) True G147718
TU218274 lncRNA downstream 240434 18596085 ~ 18597397 (-) True G147714
TU218215 lncRNA downstream 368980 18381187 ~ 18468851 (-) False G147673
TU218206 lncRNA downstream 453937 18381187 ~ 18383894 (-) False G147673
TU218339 lncRNA upstream 18161 18923823 ~ 18951882 (-) False acsl6
XR_006247438.1 lncRNA upstream 49217 18954879 ~ 18972995 (-) True LOC122326191
TU218343 lncRNA upstream 49222 18954884 ~ 18971976 (-) False LOC122326191
TU218344 lncRNA upstream 69107 18974769 ~ 18975527 (-) True G147756
TU218386 lncRNA upstream 71026 18976688 ~ 18977162 (-) True G147781
XM_043221284.1 mRNA downstream 18289 18817782 ~ 18819542 (-) True LOC122326419
XM_043221738.1 mRNA downstream 102418 18730994 ~ 18735413 (-) False sap30l
XM_043221739.1 mRNA downstream 102420 18730994 ~ 18735411 (-) True sap30l
XM_043220815.1 mRNA downstream 132746 18702021 ~ 18705085 (-) True LOC122326130
XM_043221681.1 mRNA downstream 214513 18617610 ~ 18623318 (-) True faxdc2
XM_043221253.1 mRNA upstream 12839 18918501 ~ 18921281 (-) True LOC122326398
XM_043221743.1 mRNA upstream 18086 18923748 ~ 18945799 (-) True acsl6
XM_043220913.1 mRNA upstream 77328 18982990 ~ 18991517 (-) True sar1b
TU218335 other downstream 92693 18743184 ~ 18745138 (-) True G147751
TU218309 other downstream 128229 18707704 ~ 18709602 (-) True G147740
TU218295 other downstream 136769 18699622 ~ 18701062 (-) True G147728
XR_006247482.1 other downstream 285087 18549531 ~ 18552744 (-) True rbm11
TU218205 other downstream 368980 18458374 ~ 18468851 (-) True G147673
TU218428 other upstream 119860 19025522 ~ 19103650 (-) True G147810
TU218399 other upstream 141684 19047346 ~ 19128737 (-) True G147791

Expression Profile