RNA id: TU218339



Basic Information


Item Value
RNA id TU218339
length 595
lncRNA type sense_over
GC content 0.48
exon number 2
gene id acsl6
representative False

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18923748 ~ 18951882 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCTTGCGGCTGTCGCGGCTCTTGGttctcttcatcttcttcttggCGATGGCGGGAAGCATGCGGTAGACTCTGACCGCGCCGCAGCCCTTGTTCACGCTCCTGTCCTTCACCTCCTCGATGTCTGGGAGTGAGTTCATGGCACAGCGGAAGTTGGCCTTCCAGGTCTTGGGGTCGGGATGGGTTTCTCCCTCCTTGTATTTACCTGAAGAGAGGAGCCGAGTCTGAGCACACCTGCGGCGGagcgggagtgtgtgtgtgtgtgtgtgtgtgtgTTATTCTCCGTTTGGATGCCACTAAGCTCTTTATGCTTACTGTATTTCTTACGAATCAACACAAGTGTACATTCCTCCTAATTTCAGGGCTCCTAATTTAACGGTCAGTAAAACGCCAGACTGAAGACGTCTCTCAGTCAAACACCTATTAGTCAGTCTGAACATGTGAGCCTTACACATTTTGTATTGCGTTaaatttgagagaaaaaaagagattttccCACGGTTTTGTCCagctgttgtttgtgttttgtttattgaaaCAGTTCACTTGCATCTTTTCCTGATAACGAAGTCTTTTATGCGCATGTACATCTCtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218363 lncRNA downstream 18161 18837831 ~ 18905662 (-) True G147765
TU218327 lncRNA downstream 21786 18736022 ~ 18902037 (-) False G147749
TU218331 lncRNA downstream 21786 18736022 ~ 18902037 (-) True G147749
TU218366 lncRNA downstream 77413 18844996 ~ 18846410 (-) True G147767
TU218310 lncRNA downstream 211773 18710652 ~ 18712050 (-) True G147741
XR_006247438.1 lncRNA upstream 2997 18954879 ~ 18972995 (-) True LOC122326191
TU218343 lncRNA upstream 3002 18954884 ~ 18971976 (-) False LOC122326191
TU218344 lncRNA upstream 22887 18974769 ~ 18975527 (-) True G147756
TU218386 lncRNA upstream 24806 18976688 ~ 18977162 (-) True G147781
TU218387 lncRNA upstream 27199 18979081 ~ 18979458 (-) True G147782
XM_043221253.1 mRNA downstream 2542 18918501 ~ 18921281 (-) True LOC122326398
XM_043221252.1 mRNA downstream 5348 18751360 ~ 18918475 (-) True LOC122326397
XM_043221286.1 mRNA downstream 46319 18873364 ~ 18877504 (-) False LOC122326420
XM_043221285.1 mRNA downstream 46320 18873367 ~ 18877503 (-) True LOC122326420
XM_043221284.1 mRNA downstream 104281 18817782 ~ 18819542 (-) True LOC122326419
XM_043220913.1 mRNA upstream 31108 18982990 ~ 18991517 (-) True sar1b
TU218329 other downstream 19350 18903531 ~ 18904473 (-) False G147749
TU218321 other downstream 19411 18903531 ~ 18904412 (-) False G147749
TU218335 other downstream 178685 18743184 ~ 18745138 (-) True G147751
TU218309 other downstream 214221 18707704 ~ 18709602 (-) True G147740
TU218295 other downstream 222761 18699622 ~ 18701062 (-) True G147728
TU218428 other upstream 73640 19025522 ~ 19103650 (-) True G147810
TU218399 other upstream 95464 19047346 ~ 19128737 (-) True G147791

Expression Profile