RNA id: TU218278


Basic Information

Item Value
RNA id TU218278
length 444
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G147718
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 18604208 ~ 18605161 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCTCAGGTCGTTTCTGCCGTTAGGAGGAACTCGATGGGCATCGAACTGACGAGTGTTGTTCCTGGAGGCCGAGCGCTCGCGGGGACCCTCGGACTTCACCTCGATCATCAGAGGAACCCACTTGTGCTTATTTCCTGTGACATCTCGCTTCTTTTGTCCGTTCTTCTGCGACTCCTCGTCGGTGTTTTTCTCTTCTCCAGAGTCGTCTGACTTGGCTTTTAGGTTCTCTTTGCTCTCTTCGTTTTCCCTCTTTCCCTTGGACTCTCGTTTGACCACCGACTTCTTCACCACCTGACCGCATCACAGACAGATAAACGATCACAATCGAGCCCGTCTCTGTACTCTGTGCCCTCAGAAGACGGCTGAGATCGAGTCGTACCTGGACCTCTTTGGTGGCGATCTCTCCGGGGGTCGGCCAGTTGTTCGTATCTCCGAAATCCCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218274 lncRNA downstream 6811 18596085 ~ 18597397 (-) True G147714
TU218215 lncRNA downstream 135357 18381187 ~ 18468851 (-) False G147673
TU218194 lncRNA downstream 195758 18331161 ~ 18408450 (-) False G147671
TU218310 lncRNA upstream 105491 18710652 ~ 18712050 (-) True G147741
TU218327 lncRNA upstream 130861 18736022 ~ 18902037 (-) False G147749
TU218331 lncRNA upstream 130861 18736022 ~ 18902037 (-) True G147749
TU218363 lncRNA upstream 232670 18837831 ~ 18905662 (-) True G147765
TU218366 lncRNA upstream 239835 18844996 ~ 18846410 (-) True G147767
XM_043221940.1 mRNA downstream 8503 18591539 ~ 18595705 (-) True wdr55
XM_043221396.1 mRNA downstream 18767 18575504 ~ 18585441 (-) True cdc23
XM_043221403.1 mRNA downstream 39244 18560353 ~ 18564964 (-) True si:dkey-71d15.2
XM_043221405.1 mRNA downstream 40762 18560354 ~ 18563446 (-) False si:dkey-71d15.2
XM_043221404.1 mRNA downstream 40959 18560352 ~ 18563249 (-) False si:dkey-71d15.2
XM_043221681.1 mRNA upstream 12449 18617610 ~ 18623318 (-) True faxdc2
XM_043220815.1 mRNA upstream 96860 18702021 ~ 18705085 (-) True LOC122326130
XM_043221738.1 mRNA upstream 125833 18730994 ~ 18735413 (-) False sap30l
XM_043221739.1 mRNA upstream 125833 18730994 ~ 18735411 (-) True sap30l
XM_043221252.1 mRNA upstream 146199 18751360 ~ 18918475 (-) True LOC122326397
XR_006247482.1 other downstream 51464 18549531 ~ 18552744 (-) True rbm11
TU218205 other downstream 135357 18458374 ~ 18468851 (-) True G147673
TU217960 other downstream 433624 18170080 ~ 18170584 (-) True G147531
TU217955 other downstream 476209 18126229 ~ 18127999 (-) True G147526
TU217615 other downstream 1349836 17153582 ~ 17254372 (-) False fstl4
TU218295 other upstream 94461 18699622 ~ 18701062 (-) True G147728
TU218309 other upstream 102543 18707704 ~ 18709602 (-) True G147740
TU218335 other upstream 138023 18743184 ~ 18745138 (-) True G147751
TU218321 other upstream 298370 18903531 ~ 18904412 (-) False G147749
TU218329 other upstream 298370 18903531 ~ 18904473 (-) False G147749

Expression Profile