RNA id: TU217615



Basic Information


Item Value
RNA id TU217615
length 801
RNA type TUCP
GC content 0.55
exon number 5
gene id fstl4
representative False

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17094588 ~ 17254372 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


acagaagagtgTGACAGCAGTGCAGCAGACACAGAGATCTTCTCAgcagcgcgcgcgcgtgtgtgttatatatatataaatatatatgtacgcGCTGTGTGACGTCgcaggcagtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgagaaagagcgCAGTTGATATAGGGTGAGCTGGAACAGCGGGTCACTCTCAGTTGAAGGATGGAGTGAGATCGGGTGTGTTTCTCCGTTCGCCTGGACTGTGAGGGTCTGTGAGTCTCTGGACACCTATAACGCGCGTTTCACGCAGCATTTCTGTCTCCGCGCGGGAACACGACAGgctGGCGCTGATGGGCTGCTTGGGCGTCTGGACTTTGTCCGTCCTGCTCGGATCTTCCCTATGGCTGTCATATGGAGTCCGAGTCGGCGCTGGATCCGGAACTACAGCAAAGGAGGAACTTCAGCAATATGGAGGAGCTGAAAATAAAGTCAAGCAAAATGGGGGTCCGTGCAGGAGGACGTACTGTGGCCGGGGTCGGGAGTGTGTGGTCAGGGAAGTCACGGGCCGGGCCGAGTGCGTGTGCCAGGAAAGCTGCCACACTTCGTTTGTGCCCGTGTGTGGCTCTGACGGACGTTTTTATGAGAACCACTGTGAGCTTTACCGCACCGCTTGCCTGCAGCGGAGGAGAATCTATGTGGTCCACAGCAAAGACTGCTTTTTTAAAGGAGGCGCGTGCACCATGGCGGAGTACAACAAGCTGAAGAGCATGCTTCTGGACATGCAGCCCAGGACCTCCACGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217604 lncRNA downstream 93516 17057878 ~ 17060066 (-) True G147295
TU217552 lncRNA downstream 206191 16946613 ~ 16947391 (-) True G147265
TU217532 lncRNA downstream 281525 16869670 ~ 16872057 (-) True G147252
XR_006247504.1 lncRNA downstream 318079 16834707 ~ 16835503 (-) True LOC122326728
XR_006247503.1 lncRNA downstream 318079 16834764 ~ 16835503 (-) False LOC122326728
TU217785 lncRNA upstream 77428 17331800 ~ 17333076 (-) True G147413
TU217786 lncRNA upstream 87367 17341739 ~ 17342024 (-) True G147414
TU217789 lncRNA upstream 105186 17359558 ~ 17360596 (-) True G147417
TU217796 lncRNA upstream 121934 17376306 ~ 17376806 (-) True G147423
TU217799 lncRNA upstream 127245 17381617 ~ 17382570 (-) True G147426
XM_043220901.1 mRNA downstream 216681 16933212 ~ 16936901 (-) True zcchc10
XM_043220900.1 mRNA downstream 220504 16900947 ~ 16933078 (-) True aff4
XM_043220899.1 mRNA downstream 228001 16900947 ~ 16925581 (-) False aff4
XM_043221762.1 mRNA downstream 253894 16873986 ~ 16899688 (-) False shroom1
XM_043221763.1 mRNA downstream 253894 16873986 ~ 16899688 (-) True shroom1
XM_043221879.1 mRNA upstream 61040 17315412 ~ 17320356 (-) True c21h5orf15
XM_043221764.1 mRNA upstream 67248 17321620 ~ 17331144 (-) True vdac1
XM_043221114.1 mRNA upstream 145484 17399856 ~ 17404439 (-) False skp1
XM_043221113.1 mRNA upstream 145484 17399856 ~ 17403738 (-) True skp1
XM_043221699.1 mRNA upstream 150987 17405359 ~ 17412380 (-) False ppp2cab
XR_006247502.1 other downstream 306361 16839576 ~ 16847221 (-) False frmd7
XR_006247428.1 other downstream 423552 16720083 ~ 16730030 (-) False LOC122326138
XR_006247552.1 other downstream 436873 16716499 ~ 16716709 (-) True LOC122327019
XR_006247559.1 other downstream 437347 16716159 ~ 16716235 (-) True LOC122327026
XR_006247561.1 other downstream 438956 16714550 ~ 16714626 (-) True LOC122327028
TU217955 other upstream 871857 18126229 ~ 18127999 (-) True G147526
TU217960 other upstream 915708 18170080 ~ 18170584 (-) True G147531
TU218205 other upstream 1204002 18458374 ~ 18468851 (-) True G147673
XR_006247482.1 other upstream 1295159 18549531 ~ 18552744 (-) True rbm11
TU218295 other upstream 1445250 18699622 ~ 18701062 (-) True G147728

Expression Profile