RNA id: XR_006247559.1



Basic Information


Item Value
RNA id XR_006247559.1
length 77
RNA type snoRNA
GC content 0.43
exon number 1
gene id LOC122327026
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16716159 ~ 16716235 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCACATGATGTGATTTAGATTGCATTAGCACTCTGTGCAAAGATGACCCGCTATCTATCACCCTTAACTGATGGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217313 lncRNA downstream 6845 16708412 ~ 16709314 (-) True G147129
XR_006247476.1 lncRNA downstream 11953 16703296 ~ 16704206 (-) False LOC122326402
TU217314 lncRNA downstream 12482 16701934 ~ 16703677 (-) True LOC122326402
TU217334 lncRNA downstream 14962 16700990 ~ 16701197 (-) True G147140
TU217332 lncRNA downstream 17552 16697809 ~ 16698607 (-) True G147138
TU217472 lncRNA upstream 31772 16748007 ~ 16752890 (-) True G147217
TU217480 lncRNA upstream 46869 16763104 ~ 16763420 (-) True G147223
TU217511 lncRNA upstream 101208 16817443 ~ 16817786 (-) True G147239
XR_006247504.1 lncRNA upstream 118472 16834707 ~ 16835503 (-) True LOC122326728
XR_006247503.1 lncRNA upstream 118529 16834764 ~ 16835503 (-) False LOC122326728
XM_043221695.1 mRNA downstream 66463 16634014 ~ 16649696 (-) True csf1rb
XM_043221696.1 mRNA downstream 82262 16627206 ~ 16633897 (-) True LOC122326634
XM_043220805.1 mRNA downstream 89892 16622043 ~ 16626267 (-) True sra1
XM_043222034.1 mRNA downstream 168374 16528130 ~ 16547785 (-) True ammecr1
XM_043222085.1 mRNA downstream 210487 16502695 ~ 16505672 (-) True fundc2
XM_043220829.1 mRNA upstream 2837 16719072 ~ 16730029 (-) True LOC122326138
XM_043220831.1 mRNA upstream 2837 16719072 ~ 16730004 (-) False LOC122326138
XM_043220830.1 mRNA upstream 2837 16719072 ~ 16729989 (-) False LOC122326138
XM_043221873.1 mRNA upstream 48118 16764353 ~ 16770183 (-) True gpr185a
XM_043222098.1 mRNA upstream 79899 16796134 ~ 16804294 (-) True atg4a
XR_006247561.1 other downstream 1533 16714550 ~ 16714626 (-) True LOC122327028
XR_006247551.1 other downstream 1845 16714176 ~ 16714314 (-) True LOC122327018
XR_006247539.1 other downstream 2608 16713476 ~ 16713551 (-) True LOC122327005
TU217309 other downstream 82461 16631686 ~ 16633698 (-) False LOC122326634
TU217243 other downstream 376443 16339227 ~ 16339716 (-) True G147087
XR_006247552.1 other upstream 264 16716499 ~ 16716709 (-) True LOC122327019
XR_006247428.1 other upstream 3848 16720083 ~ 16730030 (-) False LOC122326138
XR_006247502.1 other upstream 123341 16839576 ~ 16847221 (-) False frmd7
TU217615 other upstream 437347 17153582 ~ 17254372 (-) False fstl4
TU217955 other upstream 1409994 18126229 ~ 18127999 (-) True G147526