RNA id: XM_043221873.1


Basic Information

Item Value
RNA id XM_043221873.1
length 3708
RNA type mRNA
GC content 0.44
exon number 3
gene id gpr185a
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16764353 ~ 16770183 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAACGCGTTATGAGCGGAATGACAAGCCGAGGCTGAACGCTGCCCAGATGCGCTTGGCATGGGATGCTTTCCTGAGCCTCATCTATTCTTCATCTTCACTTGATGGAAGAGGGATGGAGAAACAAGATCGCTCTGTGTGATTCACCCTCCTGCTGTAGCAATGAGTAACCTGCTCCAAAACACTTCTCTTCTGAACTGGGATGGATCAGAAGGAAGAAACACGTCGTCTGCCCCGTCCTGGGAGCTGGAGCCGGTGCCCGCCTTCGTCAACCCGTGGGACGTCCTGCTGTGCGTGACGGGCACGCTCATGTCCTGCGAGAACGCGGTGGTGATCGCTCTGATCGCTTACACGCCCACCCTAAGAGCGCCCATGTTCGTCCTCATCGGGAGTCTAGCGTTCGCCGACCTCCTGGCCGGCCTGGGCCTGATCCTCAATTTCATCGTGACCTACATAATTGATTCGGGATTCGTCACGCTGCTGTCGGCGGGGCTCCTCATCACGGCCTTCTCGGCGTCCGTGCTCAACATCCTCGCGATCACCGTGGACCGTTACCTGTCGCTGTACAACGCGCTAACGTACCACACCGAGGGCACGGTGACGTTCACTTACGTCACGCTCGTGCTGATGTGGGTCATCAGCACCGCGCTCGGCTCGCTCCCCGTCCTGGGCTGGAACTGCTTGGAGGACGAGAGCACGTGTAGCATCTGCCGGCCGGTGAACAAGAACAACGCCGCGGCTCTCGCCGTGTCCTTCCTCCTGGTCTTCGCTCTCATTCTGCAGCTGTACCTTCAGATCTGCAAGATCGCTTTCCGGCACGCTCAGCAAATCGCCGTGCAGCGTCAGTTTATGACTACCTCGCACTCGTCTTCCACCACCAAGGGGGTCTCCACCCTCACCACCATCCTGGGCACTTTCGCCTTCTGTTGGATCCCTCTCGCCATGTACTCGCTGGTAGCGGACACCCGATCACCTGTGATCTACACCTACGCTACGGCTCTTCCGGCCATCTGCCACTCCATCATCAACCCCATGATATACGCGTTCAGGAACCCTGAAATTCTCCGGTCTTTGAGGATCGCTTGTTGCTGGTGCATGCCTTACAGTTTCACCATGCGACCCAGGACACCCAGCGACGTGTAGCGTCTTCAGATTAAAGCACAGTTTTGGAGGCGGCCTGTCTGTGAAGCACACGCGATCCACATATTGTAATCCAGTGGAGTGGgtgaatatttctttatttggcCCATTTGGTAGCTCTTCATAGCATTGTGTCCATGTTACATGTACGGTATTTGACATGTTACTATGATTAACTGGCCATTCGAATAAACGTCACGTTTAACTTCCTCACGGTAAGGGACATGGCGATGGTAGAAAGTTAGATTGGGTGAAAATTTAGGTGCTTTTGTGCTTCTCAATTATCGAGAATAATATGAGGTTGGAGGATAaactatatattaatgttttgcattttctcacaaagctttaaatgttatatttgctTGATATCTTTCACATATTTCGCATTCGCTCACAAAATGTTGCGTTCACTCTCAAGACTTCCTATGTTTGCTTGCAAAAACCTTTATGACAGAAATAATGTGGGGTGGGAAGAAAGACTATATTTCAATGTTTTCGTGTTCTTACAAGACTTACATTTCTAAGAGAACATCTGCATTCGCTCCCAAAACATTTGCTTATTACTGAAtaattttgcattcatttgttaaaCTTTGGGGTTCAACACTTTTGCGCTTAGAACCGCCGCATTCGCTCGAAAAACTTTTGCGGCGGAAATAAGATCGTTTTGGAGAAAACTAATTATTTCGGTACTCTTGTGAGAGAATAAAAAGTTCCTGGTGGAAATGTAATAGTTTTAGTGAGACAATGCAAGAGGCGTAAGGTTTCTCAGGAGAATGAGTTGATTTTGcgagagaaaacaaacacttcTTACCATCTACTTTCTTCCATCGCCGTGTCCCCTCAAGGGCTTTGTACTGactgacaacaaaaaaaaacttgcaagtTGCTTTACACCACagtacaaatgtaaaaacaaaaaactataatgGTTTATGACATACTGTGTAATGACTGTACTGGGCAGATAATCTGTGGTTGTCAGGGTTGTTTCCAAGCCCTTGAGTTCAGACACTGGCGTATGTTCCtaatataaagcaaatataaaaaaatgggaGACTGAATGTACAATAAACGATGATTGTTGTTTGTGTGCCAGATATACAGGATACCTACAGTACTGTACAGTGAACCACAGCTACAGTACAAATACAATCTGCTGCTGGTTAATTCGACAAAATACTAGAATGCAGAAAAACAACACTGCACTTCAGTACTATCAAAAGACAGCTTAATTACAAAGAGGTCCAAATAATTACACATGAACTATTTTATACTCAGAATGTGAGCACGCAGTAACAAGAACACTGTAATGCAAAGATTGACCTGCCATTTCTGTAGGGATGTTTGGTGGCATTGATATAAATTGACgtttttgaatgcattaagACAGTACTCCAGTGCTGGAGTTAATCAGACAGATACAGATAACATCGTCATCAAAAGGGTATATATAGGCCTGTAATTATCAAAATGTAGCATACACATTGCACTGTTGTCTGTAAGCACTGTGGTATGCTTGCATCTTACAAATCGTCCCCTTAAAAGGTTAACTAATTTATTACCATCAAACTAATCACTGTACAAATATTCCATTGGTGTGCCGTTCAGTTCCTGGTCGTTTCTGAACAGCGATTCATTTATAACAGCAGAACACGTGTCAAAGTAGACGATTATTTAAATCTTATTCCATCACGTCTGGGTTTAGGTTCTCTACATTATTTCTAATACGCTGATATATATTGATGTGATCTTCCAGGCGTATTTTCTACCATACAAACAGACATAGAGATAATCGTTTTCCGTAGCGCACTATTGATCGCTTGCACATTTCATTGATGCCGACATCAATCAAATGACCTAAATGGTGTTGTGTGAATGTGTGGTTCGGTACGCCTTATCTGCACTTGCTTTAAATGTCGCAAACATTAGCTGCGTTTGTATCCACAGTCGTTTTCAGTAGGACGCGGGGGCCCGCTTGGAAAACATCGGTATCATCTACTAAAAACGCGTAGATCATCAGCATCTTCTAGTAGAGGCAGCCAAAGAAACAAACTTGACATGTTGGACTCACTGAGCTTGAATGAAACTACTGTGTTACGTTATGGTATAAAATGTCTACATGTCTGAATGTACTGTGATAAAAGTTTCACTTGAGCAGCTGTGATTGTCTCGGACTTTAACTTCGTAAGACGGCGTAACAAAAAATACTGGTCTTTATACACGACATCGTCACGTTGCCATTATTTTCTGTCCAACATTTATATAGaagtatatttttgtacttGATTAGAAAGTTGCACTCTTTGTGTGTTGAGCCGAGTTGTATTGAGATGGGTCCCATTAATAGCATGTCACGGTGTCATTGATCTCTGTCCAGCAGTTACTCCAGAAACCTGTGTGGAATTTAATACTAGCCTACTGCTTACTGCACAGTGTTAGTGTTTCTCAACTTTTATCGACTTCAAGGCCCCCCTTCGTTCGAGACGATATTCAGAGGCCCTTTTAGCTAAGCTGATGTGCATCTGATACTTCAGTTGTAACGAtaataaatgcatctaaaaagA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU217480 lncRNA downstream 933 16763104 ~ 16763420 (-) True G147223
TU217472 lncRNA downstream 11463 16748007 ~ 16752890 (-) True G147217
TU217313 lncRNA downstream 55039 16708412 ~ 16709314 (-) True G147129
XR_006247476.1 lncRNA downstream 60147 16703296 ~ 16704206 (-) False LOC122326402
TU217314 lncRNA downstream 60676 16701934 ~ 16703677 (-) True LOC122326402
TU217511 lncRNA upstream 47260 16817443 ~ 16817786 (-) True G147239
XR_006247504.1 lncRNA upstream 64524 16834707 ~ 16835503 (-) True LOC122326728
XR_006247503.1 lncRNA upstream 64581 16834764 ~ 16835503 (-) False LOC122326728
TU217532 lncRNA upstream 99487 16869670 ~ 16872057 (-) True G147252
TU217552 lncRNA upstream 176430 16946613 ~ 16947391 (-) True G147265
XM_043220829.1 mRNA downstream 34324 16719072 ~ 16730029 (-) True LOC122326138
XM_043220831.1 mRNA downstream 34349 16719072 ~ 16730004 (-) False LOC122326138
XM_043220830.1 mRNA downstream 34364 16719072 ~ 16729989 (-) False LOC122326138
XM_043221255.1 mRNA downstream 45948 16710794 ~ 16718405 (-) True LOC122326401
XM_043221695.1 mRNA downstream 114657 16634014 ~ 16649696 (-) True csf1rb
XM_043222098.1 mRNA upstream 25951 16796134 ~ 16804294 (-) True atg4a
XM_043221837.1 mRNA upstream 68155 16838338 ~ 16847221 (-) False frmd7
XM_043221836.1 mRNA upstream 68155 16838338 ~ 16847221 (-) False frmd7
XM_043221838.1 mRNA upstream 68155 16838338 ~ 16847221 (-) False frmd7
XM_043221835.1 mRNA upstream 68155 16838338 ~ 16847221 (-) True frmd7
XR_006247428.1 other downstream 34323 16720083 ~ 16730030 (-) False LOC122326138
XR_006247552.1 other downstream 47644 16716499 ~ 16716709 (-) True LOC122327019
XR_006247559.1 other downstream 48118 16716159 ~ 16716235 (-) True LOC122327026
XR_006247561.1 other downstream 49727 16714550 ~ 16714626 (-) True LOC122327028
XR_006247551.1 other downstream 50039 16714176 ~ 16714314 (-) True LOC122327018
XR_006247502.1 other upstream 69393 16839576 ~ 16847221 (-) False frmd7
TU217615 other upstream 383399 17153582 ~ 17254372 (-) False fstl4
TU217955 other upstream 1356046 18126229 ~ 18127999 (-) True G147526
TU217960 other upstream 1399897 18170080 ~ 18170584 (-) True G147531
TU218205 other upstream 1688191 18458374 ~ 18468851 (-) True G147673

Expression Profile