Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006247502.1 |
| length | 1164 |
| RNA type | transcript |
| GC content | 0.51 |
| exon number | 11 |
| gene id | frmd7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056719.1 |
| NCBI id | CM032088.1 |
| chromosome length | 19199999 |
| location | 16838338 ~ 16847221 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0019898 | extrinsic component of membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0008092 | cytoskeletal protein binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006247504.1 | lncRNA | downstream | 4073 | 16834707 ~ 16835503 (-) | True | LOC122326728 |
| XR_006247503.1 | lncRNA | downstream | 4073 | 16834764 ~ 16835503 (-) | False | LOC122326728 |
| TU217511 | lncRNA | downstream | 21790 | 16817443 ~ 16817786 (-) | True | G147239 |
| TU217480 | lncRNA | downstream | 76156 | 16763104 ~ 16763420 (-) | True | G147223 |
| TU217472 | lncRNA | downstream | 86686 | 16748007 ~ 16752890 (-) | True | G147217 |
| TU217532 | lncRNA | upstream | 22449 | 16869670 ~ 16872057 (-) | True | G147252 |
| TU217552 | lncRNA | upstream | 99392 | 16946613 ~ 16947391 (-) | True | G147265 |
| TU217604 | lncRNA | upstream | 210657 | 17057878 ~ 17060066 (-) | True | G147295 |
| TU217785 | lncRNA | upstream | 484579 | 17331800 ~ 17333076 (-) | True | G147413 |
| TU217786 | lncRNA | upstream | 494518 | 17341739 ~ 17342024 (-) | True | G147414 |
| XM_043222098.1 | mRNA | downstream | 35282 | 16796134 ~ 16804294 (-) | True | atg4a |
| XM_043221873.1 | mRNA | downstream | 69393 | 16764353 ~ 16770183 (-) | True | gpr185a |
| XM_043220829.1 | mRNA | downstream | 109547 | 16719072 ~ 16730029 (-) | True | LOC122326138 |
| XM_043220831.1 | mRNA | downstream | 109572 | 16719072 ~ 16730004 (-) | False | LOC122326138 |
| XM_043220830.1 | mRNA | downstream | 109587 | 16719072 ~ 16729989 (-) | False | LOC122326138 |
| XM_043221841.1 | mRNA | upstream | 4846 | 16852067 ~ 16864141 (-) | False | sept8a |
| XM_043221842.1 | mRNA | upstream | 4851 | 16852072 ~ 16868915 (-) | False | sept8a |
| XM_043221839.1 | mRNA | upstream | 4852 | 16852073 ~ 16869006 (-) | True | sept8a |
| XM_043221840.1 | mRNA | upstream | 8473 | 16855694 ~ 16869006 (-) | False | sept8a |
| XM_043221762.1 | mRNA | upstream | 26765 | 16873986 ~ 16899688 (-) | False | shroom1 |
| XR_006247428.1 | other | downstream | 109546 | 16720083 ~ 16730030 (-) | False | LOC122326138 |
| XR_006247552.1 | other | downstream | 122867 | 16716499 ~ 16716709 (-) | True | LOC122327019 |
| XR_006247559.1 | other | downstream | 123341 | 16716159 ~ 16716235 (-) | True | LOC122327026 |
| XR_006247561.1 | other | downstream | 124950 | 16714550 ~ 16714626 (-) | True | LOC122327028 |
| XR_006247551.1 | other | downstream | 125262 | 16714176 ~ 16714314 (-) | True | LOC122327018 |
| TU217615 | other | upstream | 306361 | 17153582 ~ 17254372 (-) | False | fstl4 |
| TU217955 | other | upstream | 1279008 | 18126229 ~ 18127999 (-) | True | G147526 |
| TU217960 | other | upstream | 1322859 | 18170080 ~ 18170584 (-) | True | G147531 |
| TU218205 | other | upstream | 1611153 | 18458374 ~ 18468851 (-) | True | G147673 |
| XR_006247482.1 | other | upstream | 1702310 | 18549531 ~ 18552744 (-) | True | rbm11 |
