RNA id: XR_006247561.1



Basic Information


Item Value
RNA id XR_006247561.1
length 77
RNA type snoRNA
GC content 0.48
exon number 1
gene id LOC122327028
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16714550 ~ 16714626 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCACATGATGTCACGTAGATTGCATTAGCGCTCTGTGCCAAGATGACCTGATATCTATCACCCTTGACTGATGGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217313 lncRNA downstream 5236 16708412 ~ 16709314 (-) True G147129
XR_006247476.1 lncRNA downstream 10344 16703296 ~ 16704206 (-) False LOC122326402
TU217314 lncRNA downstream 10873 16701934 ~ 16703677 (-) True LOC122326402
TU217334 lncRNA downstream 13353 16700990 ~ 16701197 (-) True G147140
TU217332 lncRNA downstream 15943 16697809 ~ 16698607 (-) True G147138
TU217472 lncRNA upstream 33381 16748007 ~ 16752890 (-) True G147217
TU217480 lncRNA upstream 48478 16763104 ~ 16763420 (-) True G147223
TU217511 lncRNA upstream 102817 16817443 ~ 16817786 (-) True G147239
XR_006247504.1 lncRNA upstream 120081 16834707 ~ 16835503 (-) True LOC122326728
XR_006247503.1 lncRNA upstream 120138 16834764 ~ 16835503 (-) False LOC122326728
XM_043221695.1 mRNA downstream 64854 16634014 ~ 16649696 (-) True csf1rb
XM_043221696.1 mRNA downstream 80653 16627206 ~ 16633897 (-) True LOC122326634
XM_043220805.1 mRNA downstream 88283 16622043 ~ 16626267 (-) True sra1
XM_043222034.1 mRNA downstream 166765 16528130 ~ 16547785 (-) True ammecr1
XM_043222085.1 mRNA downstream 208878 16502695 ~ 16505672 (-) True fundc2
XM_043220829.1 mRNA upstream 4446 16719072 ~ 16730029 (-) True LOC122326138
XM_043220831.1 mRNA upstream 4446 16719072 ~ 16730004 (-) False LOC122326138
XM_043220830.1 mRNA upstream 4446 16719072 ~ 16729989 (-) False LOC122326138
XM_043221873.1 mRNA upstream 49727 16764353 ~ 16770183 (-) True gpr185a
XM_043222098.1 mRNA upstream 81508 16796134 ~ 16804294 (-) True atg4a
XR_006247551.1 other downstream 236 16714176 ~ 16714314 (-) True LOC122327018
XR_006247539.1 other downstream 999 16713476 ~ 16713551 (-) True LOC122327005
TU217309 other downstream 80852 16631686 ~ 16633698 (-) False LOC122326634
TU217243 other downstream 374834 16339227 ~ 16339716 (-) True G147087
TU217241 other downstream 409839 16303857 ~ 16304711 (-) False LOC122326033
XR_006247559.1 other upstream 1533 16716159 ~ 16716235 (-) True LOC122327026
XR_006247552.1 other upstream 1873 16716499 ~ 16716709 (-) True LOC122327019
XR_006247428.1 other upstream 5457 16720083 ~ 16730030 (-) False LOC122326138
XR_006247502.1 other upstream 124950 16839576 ~ 16847221 (-) False frmd7
TU217615 other upstream 438956 17153582 ~ 17254372 (-) False fstl4