RNA id: TU217334



Basic Information


Item Value
RNA id TU217334
length 208
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G147140
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16700990 ~ 16701197 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCTGCCACAAAAAGCTAGTGACTAAAAAAAGTAAGGGGTTTCAGAGACGCAACAACTATGTTTCCTGGATGGAACGCGACAAACATCGCCTCCAAAGTCCTGTAGAAATAATCCAATCCGATGCAACTCCTTGAGTGTTTGCCATTTTGTGTCTTATGCGTCAGACATTCAGCCAAGGGTTCAAGGGTGTGACGTCTGAGGTCGAGGC

Function


GO: NA

KEGG:

id description
ko04217 Necroptosis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217332 lncRNA downstream 2383 16697809 ~ 16698607 (-) True G147138
XR_006247421.1 lncRNA downstream 146335 16553839 ~ 16554655 (-) True LOC122326074
TU217253 lncRNA downstream 191743 16508381 ~ 16509247 (-) True G147096
TU217247 lncRNA downstream 252917 16376051 ~ 16448073 (-) True G147090
TU217236 lncRNA downstream 464573 16231707 ~ 16236417 (-) True G147081
TU217314 lncRNA upstream 737 16701934 ~ 16703677 (-) True LOC122326402
XR_006247476.1 lncRNA upstream 2099 16703296 ~ 16704206 (-) False LOC122326402
TU217313 lncRNA upstream 7215 16708412 ~ 16709314 (-) True G147129
TU217472 lncRNA upstream 46810 16748007 ~ 16752890 (-) True G147217
TU217480 lncRNA upstream 61907 16763104 ~ 16763420 (-) True G147223
XM_043221695.1 mRNA downstream 51294 16634014 ~ 16649696 (-) True csf1rb
XM_043221696.1 mRNA downstream 67093 16627206 ~ 16633897 (-) True LOC122326634
XM_043220805.1 mRNA downstream 74723 16622043 ~ 16626267 (-) True sra1
XM_043222034.1 mRNA downstream 153205 16528130 ~ 16547785 (-) True ammecr1
XM_043222085.1 mRNA downstream 195318 16502695 ~ 16505672 (-) True fundc2
XM_043221255.1 mRNA upstream 9597 16710794 ~ 16718405 (-) True LOC122326401
XM_043220829.1 mRNA upstream 17875 16719072 ~ 16730029 (-) True LOC122326138
XM_043220831.1 mRNA upstream 17875 16719072 ~ 16730004 (-) False LOC122326138
XM_043220830.1 mRNA upstream 17875 16719072 ~ 16729989 (-) False LOC122326138
XM_043221873.1 mRNA upstream 63156 16764353 ~ 16770183 (-) True gpr185a
TU217309 other downstream 67292 16631686 ~ 16633698 (-) False LOC122326634
TU217243 other downstream 361274 16339227 ~ 16339716 (-) True G147087
TU217241 other downstream 396279 16303857 ~ 16304711 (-) False LOC122326033
TU217095 other downstream 538759 16154364 ~ 16162231 (-) False G146999
TU217094 other downstream 539995 16154364 ~ 16160995 (-) True G146999
XR_006247539.1 other upstream 12279 16713476 ~ 16713551 (-) True LOC122327005
XR_006247551.1 other upstream 12979 16714176 ~ 16714314 (-) True LOC122327018
XR_006247561.1 other upstream 13353 16714550 ~ 16714626 (-) True LOC122327028
XR_006247559.1 other upstream 14962 16716159 ~ 16716235 (-) True LOC122327026
XR_006247552.1 other upstream 15302 16716499 ~ 16716709 (-) True LOC122327019

Expression Profile