RNA id: TU217313



Basic Information


Item Value
RNA id TU217313
length 903
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G147129
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16708412 ~ 16709314 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCTTTTGTATGAGGTCCATCCAATTCACCTCCAAGGTAAACCGTGTCCTCCACCGCAGATCCATCTTGTGCATCACTCTCTGGTCTGGGTTGTCTCTCTACCCTGTTTGAGTAGTAATACCACAGATCATCCTCGTCACTTTCAGACTCGGTTCTGGGTGCATATTCTCTTTGTGTCACACTCCTCCCtcttaactctttcttttgttttctttccacaagTCCTGTCCTGGTCTCTGGCGGCGCAGAAACTTTTCTTGGGTCTTCAGGAATGGACAACCTCACTTCATCCCCAACAGGTAAGATATGGTCTCGGTGTAACATTCTCATACTCCCCATACCGGATTCAGGTTTCAGGCGATACACAGGTAAGTTTTTTAACTTTTCCACCACCAGGTAGGGAATGGAATTCCACTTGTCACCAAGTTTGTTCTTTCCTGTCAAGGCCAGATTTCGTATCAACACACGATCTCCGACAGCTAAGGTCTGGTGTTTTACTTGCTTGTCGTACAAccgtttgtttttctgttgactTTTCTGGGAAGATTCCGTTGCTAATTGATACGCTTTCTGTAACTCTGTTTTCATTCTTTCGACATACTGTCGATGGCTACCAGCTCCTTTTCCATCAGGTGAAGTCCCAAAACACACATCCACCGGCAAGCGAGCTTCTCTCCCGAACATAAGATAGTACGGTGAGTAACCAGTTGCTTCGTTCTTAGTACAGTTGTAAGCGTGTACTAAACTGTTAATGTGTTGACTCCATCTGCTTTTCTCTACAGGATTCAGGGTACCAAGCATGGAAAGTAGTGTTCTGTTGAATCTCTCAGGCTGGGGGTCCCCTTGTGGATGATAGGGAGACGTCCTAGATTTTCTGATTCCCAGCATACTCAGGAGCTCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247476.1 lncRNA downstream 4206 16703296 ~ 16704206 (-) False LOC122326402
TU217314 lncRNA downstream 4735 16701934 ~ 16703677 (-) True LOC122326402
TU217334 lncRNA downstream 7215 16700990 ~ 16701197 (-) True G147140
TU217332 lncRNA downstream 9805 16697809 ~ 16698607 (-) True G147138
XR_006247421.1 lncRNA downstream 153757 16553839 ~ 16554655 (-) True LOC122326074
TU217472 lncRNA upstream 38693 16748007 ~ 16752890 (-) True G147217
TU217480 lncRNA upstream 53790 16763104 ~ 16763420 (-) True G147223
TU217511 lncRNA upstream 108129 16817443 ~ 16817786 (-) True G147239
XR_006247504.1 lncRNA upstream 125393 16834707 ~ 16835503 (-) True LOC122326728
XR_006247503.1 lncRNA upstream 125450 16834764 ~ 16835503 (-) False LOC122326728
XM_043221695.1 mRNA downstream 58716 16634014 ~ 16649696 (-) True csf1rb
XM_043221696.1 mRNA downstream 74515 16627206 ~ 16633897 (-) True LOC122326634
XM_043220805.1 mRNA downstream 82145 16622043 ~ 16626267 (-) True sra1
XM_043222034.1 mRNA downstream 160627 16528130 ~ 16547785 (-) True ammecr1
XM_043222085.1 mRNA downstream 202740 16502695 ~ 16505672 (-) True fundc2
XM_043221255.1 mRNA upstream 1480 16710794 ~ 16718405 (-) True LOC122326401
XM_043220829.1 mRNA upstream 9758 16719072 ~ 16730029 (-) True LOC122326138
XM_043220831.1 mRNA upstream 9758 16719072 ~ 16730004 (-) False LOC122326138
XM_043220830.1 mRNA upstream 9758 16719072 ~ 16729989 (-) False LOC122326138
XM_043221873.1 mRNA upstream 55039 16764353 ~ 16770183 (-) True gpr185a
TU217309 other downstream 74714 16631686 ~ 16633698 (-) False LOC122326634
TU217243 other downstream 368696 16339227 ~ 16339716 (-) True G147087
TU217241 other downstream 403701 16303857 ~ 16304711 (-) False LOC122326033
TU217095 other downstream 546181 16154364 ~ 16162231 (-) False G146999
TU217094 other downstream 547417 16154364 ~ 16160995 (-) True G146999
XR_006247539.1 other upstream 4162 16713476 ~ 16713551 (-) True LOC122327005
XR_006247551.1 other upstream 4862 16714176 ~ 16714314 (-) True LOC122327018
XR_006247561.1 other upstream 5236 16714550 ~ 16714626 (-) True LOC122327028
XR_006247559.1 other upstream 6845 16716159 ~ 16716235 (-) True LOC122327026
XR_006247552.1 other upstream 7185 16716499 ~ 16716709 (-) True LOC122327019

Expression Profile