RNA id: TU217241



Basic Information


Item Value
RNA id TU217241
length 598
RNA type TUCP
GC content 0.63
exon number 2
gene id LOC122326033
representative False

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 16303744 ~ 16304724 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACCGACTGCACCCagagcaccgagcacccagaagataacgccactgacagcgCTAAGCGCTCGCGACCCGGCCaggagatggaggagctgcTACAGCAACTCACAGAGGTGTCCCTTCGACAGCAGCAGATCGTAGAACACCTGGCGAACCGACAAGGGCAGctcgagcaggagctcgctgcccaGGGTGCCGCCGCTCGACCGCGCCCCGCCGTGCCCGATCCCCGCATTCAAGCAGCGCAACTCCTTCCAAAAATGACCAGCTATGACGACCCAgagatttttttacagatgttcgAGAATGTCGCCGTCACGGAAGGATGGGATCGCCAAGAGTGGGCACGCGCGCTGGCCCCGCTGCTAACTGGAGAAGCGCAGCGCAGCTTCTATGCCATGCCGGCTGACCTGGCTGCCAACTATGACGACCTGAAACGGGAGATCCTCGGAAGGGTCGGTCTATCTCCGATCTGCGCAGCCCAGGGGTTCTTTGACTGGGCGTTCCAACCACGCCGACCGGCCCGGGCTCAAGTCGCCGAGCTCACCCGTCTAGCCCAACATTGGCTACTGGATCAGGACCCGACCCCCGGCCAGATCGTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217236 lncRNA downstream 67440 16231707 ~ 16236417 (-) True G147081
TU217235 lncRNA downstream 75850 16227714 ~ 16228007 (-) True G147080
TU217091 lncRNA downstream 156861 16146598 ~ 16146996 (-) True G146997
TU217058 lncRNA downstream 416365 15841548 ~ 15887492 (-) True G146982
TU217032 lncRNA downstream 624059 15675312 ~ 15679798 (-) True G146962
TU217247 lncRNA upstream 71340 16376051 ~ 16448073 (-) True G147090
TU217253 lncRNA upstream 203670 16508381 ~ 16509247 (-) True G147096
XR_006247421.1 lncRNA upstream 249128 16553839 ~ 16554655 (-) True LOC122326074
TU217332 lncRNA upstream 393098 16697809 ~ 16698607 (-) True G147138
TU217334 lncRNA upstream 396279 16700990 ~ 16701197 (-) True G147140
XM_043222084.1 mRNA downstream 556103 15703180 ~ 15747754 (-) True gabrb4
XM_043221414.1 mRNA downstream 633857 15658463 ~ 15670000 (-) True mpp1
XM_043221744.1 mRNA downstream 646968 15650303 ~ 15656889 (-) True ndfip1l
XM_043221745.1 mRNA downstream 646970 15650303 ~ 15656887 (-) False ndfip1l
XM_043221489.1 mRNA downstream 730417 15507396 ~ 15573440 (-) True LOC122326537
XM_043220722.1 mRNA upstream 193813 16498524 ~ 16500915 (-) True brcc3
XM_043222085.1 mRNA upstream 197984 16502695 ~ 16505672 (-) True fundc2
XM_043222034.1 mRNA upstream 223419 16528130 ~ 16547785 (-) True ammecr1
XM_043220805.1 mRNA upstream 317332 16622043 ~ 16626267 (-) True sra1
XM_043221696.1 mRNA upstream 322495 16627206 ~ 16633897 (-) True LOC122326634
TU217095 other downstream 141626 16154364 ~ 16162231 (-) False G146999
TU217094 other downstream 142862 16154364 ~ 16160995 (-) True G146999
TU216757 other downstream 1383459 14915978 ~ 14920398 (-) False stc2b
TU216464 other downstream 2040190 14259685 ~ 14263667 (-) True G146556
XR_006247436.1 other downstream 2076591 14223143 ~ 14227266 (-) False srsf1b
TU217243 other upstream 34516 16339227 ~ 16339716 (-) True G147087
TU217309 other upstream 326975 16631686 ~ 16633698 (-) False LOC122326634
XR_006247539.1 other upstream 408765 16713476 ~ 16713551 (-) True LOC122327005
XR_006247551.1 other upstream 409465 16714176 ~ 16714314 (-) True LOC122327018
XR_006247561.1 other upstream 409839 16714550 ~ 16714626 (-) True LOC122327028

Expression Profile