RNA id: XM_043222042.1


Basic Information

Item Value
RNA id XM_043222042.1
length 4229
RNA type mRNA
GC content 0.45
exon number 31
gene id kif4
representative True

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 12900298 ~ 12944968 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGAACTGGTCATTTGAAAGTGGCGGGCAGGGTGTTTCTTTAGAGAAAGCGATTCTCGGATTTGTATGACAGAAATGGTTAACGAAGTCTGACTCTTCATAAAATAGCGGTATTTTGGGAGTGTGATTACGTGCGTCTTCTATTATTTACGTTTTGTTTtcgattttgtttttaaaaagtatttttactaaGCTTTACTCCTCGAGGACGACAGTAACATATTGCAGCGTGTAAGTATGACCAAAGAGGATGAGAAAGTAATCCCTGTCAGGGTTGCTCTGAGATGCCGGCCTTTGGTTTCCAAAGAGATCAATGAAGGATGTCAGTGCTGTCTCACTTTTGTACCTGATGAACCTCAGGTAATTGTTGGCAATGACAAAGCTTTCACCTACGATTATGTTTTTGACCCAACAACAGAGCAGGAGGAAGTATTCAACACTGCTGTGTCTCCATTATTGTCGGGGCTAATTAGAGGTTATAATGCCACCGTTTTGGCTTATGGGCAGACAGGGTCAGGGAAGACATTCTCTATGGGTGGCACATACACATCAGAACAAGAGAACGAGACCACAGTTGGTGTCATTCCACGAGTAATAGAAAGAATCTTTCAAGAAAAGTCTAAATGTGCAGACTGTGAATTTTTGTTGATCGTATCTTACCTTGAGATTTACAATGAAGAGATCCTGGACCTGCTGTGCACATCAAAGGACAAACCGATTATCAGTATCAGAGAGGATCCAAAAGATGGAATTAAAATTGTTGGACTAACAGAAAAGGAAGTGTTTACTGCTCATGAGATGGTGGGTTGTCTTGAGTTGGGAAACTCTGCACGAACAGTGGGCTCAACAGCCATGAATGCAGCCTCATCTCGCTCGCATGCCATCTTTACCATATCACTGGAGCAGCGACGCAAAGGAGACAAGACTGATGTCATGGTCTCCAAATTGCACTTGGTGGATCTCGCTGGATCtgagaggcaaaaaaaaactaaagctgaGGGAGATCGACTCAAAGAAGGAATAAGCATTAACCGTGGACTGCTGTCTCTGGGAAACGTGATCAGTGCACTCGGTGATGAAAGCAAGAAGGGAACCTTTGTGCCATACAGGGATTCCAAACTGACACGCCTCTTACAGGACTCTCTCGGAGGAAACAGCCACACCTTGATGATCGCGTGTGTTAGTCCAGCAGACTCCAACATTGAGGAGACCATCAATACGTTGCGCTATGCTGATCGTGCTcgtaaaattaagaataaaccAATTCTCAATGTTGACCCACGTGCAGTAGAAATGAAGCGACTTAAACAGCAGgtGCAAGAACTTCAGGTGATGCTTCTGCATGCCCGTGGAGGTGTTGCATCTGTGCTGACAGGGTCTGAGCCAGCAGAGAATGTGTCAAACATCCTGGAACACAATCGCTGTCTGCAAGATGAAAACAGCAAGCTGAGCCGAGAGCTGAGTGAGGCTGTGGGACAGACAGCTTTTATGTTTGAAAGGATTATCATGATTGAGCAGACAAATGAGAAACTGCAAAGCAAAATGGATGAGTTAAGGCAGCATGCAGCGTGTAAGGTGGACCTACATAAGATGGTGGAAACCCTGGAAGACCAGGAACTGAAGGAGAATATGGAGGTGATTCAGAGCCTTCAACAGCTTATTCTAGAACTGCAGAATGAGAGTGCAGGGATTGCTGCCACCATAGATGCGATGACTTCAGGCAATACTTCAGCTCTGGAGGTACTTGCAGGGTGTTCTTCTGTTGGCCCGTCAGTGGAAATCAGTGCTGATCCTCAGGCCAAAGACGCTCCTGAAGCCTATACAGCCCAGCATGCACTGCGACAGGCTCAGATGTCGAAGGAACTGATTGAGCTCAATAAAGTTTTGGCTCTAAAAGAAGCTTTTGTCAAGAATATGTGTCAGAATGACAGTCATTTGGAGCCCATGCAATCAGAATATCAGGAAAATATTCAAAGTCTGCATGCTTCAGTTGGCTCTCTGCAAAAAGAGAAGGAAGATCTCATTCAGGCCCTACAGTCTGCTAAGAAGGACACCAATCAAGCCAAACTAAGTGAACAACGCAGGAAGAGACTTCAGGAGCTGGAAGGGCAAATCACTgagttaaaaaagaaacttcAAGATCAATCTAAGCTGCTTAAGCTCAAAGAGTCATCTGTGCGCAATGTGGCTAAACTCAACCAGGAGATTCagGCTATGAAGTCCCAGCGGGTGCAGCTCATGAAACAGATGAAAGAGGACTCTGAGAAGTTTCGTTTGTGGAAGcaaaagaaagataaagaagTCCTACAGCTTAAAGAAAAAGATCGTAAACGACAGTATGAGATGCTAAAACTGGAGAGGGACTTCCAGAAACAGGCCAGTGTACTTCGCCGCAAGACAGAGGAGGCTGCTGCTGCTAACAAGCGTCTGAAAGATGCTCTTCAGAAGAGGAGTGAAGTTGCAGAGAAACGCAAAGAATTTCAGAACCGTGGAGCAGAGGGTGTTAGCAATAGAATCAAGAATTGGTTGCTGAATGAAGTAGAAGTGCTTGTGAGCACAGAAGAGGCCCGCCGACATCTACAAGACTTGCTGGATGACAGGAAGATGCTGGCAGAGGAGATTTCTCAGCTTCGCCAGCAGATGGAGGCAGGAGAGAGACCTGTAGCCAAAGTCCGGCGTCGTACATTGACTATTTCAGAGTTGGAAGGCAAGGGTGATCTGGAGGCCTCTATCAGCAAGCAAGTGGAGAGTCTAGAAACAGAGATGGGGCTCAGGAGTGCTCAGATAGCTGACCTGCAACAGAAGGTCCTGGATGCGGATAATGAGGGAAGAATAAAGCAGCGCTGGGATTCTATCACAGCCATAGTAGAGGCCAAGAGTGCCCTGAAGATTCTCATGGCTGAGGTTGTAGCCTCCAAGGTGGCTAATGCCAAGCTACACAGTGAGCTGAAGCAGGAAAAGGCTAATCTGCTGGATATGCAGAAAATACTGTGTGACGAGCGCAAGCTCATGTCTGCCATGGATATGGAACATCAGAGTCAACTGGTAGAAATGGAGCAGAGACACCAGGAGAAGGTGCTTTATCTCCTTGGTCAGCTCCAGAGTAAGCCTGTGGCACAGGAGAAACTGAAGGAGCAGCAGGAGGAGGTGTCTAAACGAGAGCACGAGCTAATGCAGCGTCTGAAGTTTCAGGAAGAGGAAATTGAAAAACTGCGAGAACTCAATGATCAGAACCAGAAACTCAAGGATGAAAATGAACAGTACAAACAGAAATTACTACTGACCCAGCTGACAAGTGCAAAGAAAGTCCTCTCTTCTGTGAATGAATCACCGGATACATCTTTTGAATATGTTCCACCTAAGCCCAAAGCCAAAATCTACTCGACTGCACGGGCTCGTCTGCAAGAGCCTATAGATCTAGATGAGCTCATATCTCCATCAGAATCTGAGAAAGAAGAGGACGAGTGGCATCCAGAGAAAAATGACAGAGCACGACGAGGCTCTAAGAAGTCAAAAATTAACGGCtgTGCATGTCGGGGCCGCTGTGTTAACAAGCTTTGTCGCTGCCGCAAAGGAAAAATGACCTGTGGGCAAAACTGTCTTTGTGACCATGAGAAATGTCGCAACATGGAGAACCGCAGCAATGTGGATCAGACTGAAAGTGATATGTCTAAGGACTCTGCTGCAATTCCTGAAGACCCCACAGCAGTCAGCCCACGAGATGCCACTTTTTTTAGACCGCCTAGTGTTCCACCCACAAAAAAGGAAATTGGAGACATGGGACACCTGCCTGCAGATCTGAAGCTTGAAAAGAAACCAGTCACTGATGACAACGAGAGTGACAGTGATGACTCTGAAGTGATGAACACCACTTCCAGCTTTCTCCGGAATAAAAAGAGAGGTCTAAATAacttcaaaaacagctttttctcTGGTTGTACACCCATCCGTGAAGAACACTAGCATTACAGTTGTAAAACGTGTTAACTTGTTGGTTCTTTTTTCATgaggtttaaatgtttaatacttttgtttaaattagTAAATGTAATCTAGTTTTGTCGAATCTGCACTCATTAATGCACTAACAATATGAATTGCTCGTGTCATGagttattttatagtattttaagCAATTTGTCTGTATGACATTTTCAAAGTCTGGGTTACAGATGTTACTTCTATTAAAAATCTAGTGACTTCAAtaaatagttcattttattattatta

Function

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10395 KIF4; kinesin family member 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247497.1 lncRNA downstream 50627 12847133 ~ 12849671 (-) True LOC122326625
TU215732 lncRNA downstream 55858 12821340 ~ 12844440 (-) True G146064
TU215733 lncRNA downstream 73774 12825421 ~ 12826524 (-) True G146065
TU215711 lncRNA downstream 161031 12730186 ~ 12739267 (-) True LOC122326459
TU215769 lncRNA upstream 28973 12973941 ~ 12975389 (-) True G146100
TU215799 lncRNA upstream 75501 13020469 ~ 13020691 (-) True G146124
TU215803 lncRNA upstream 78466 13023434 ~ 13023746 (-) True G146128
TU215807 lncRNA upstream 85962 13030930 ~ 13031150 (-) True G146132
TU215822 lncRNA upstream 96171 13041139 ~ 13041843 (-) True G146139
XM_043221661.1 mRNA downstream 13901 12772392 ~ 12886397 (-) False plrdgb
XM_043221664.1 mRNA downstream 13902 12772392 ~ 12886396 (-) False plrdgb
XM_043221659.1 mRNA downstream 13902 12772392 ~ 12886396 (-) False plrdgb
XM_043221660.1 mRNA downstream 13902 12772392 ~ 12886396 (-) False plrdgb
XM_043221662.1 mRNA downstream 13903 12772392 ~ 12886395 (-) False plrdgb
XM_043220690.1 mRNA upstream 155148 13100116 ~ 13101521 (-) True LOC122326016
XM_043220693.1 mRNA upstream 205915 13150883 ~ 13153001 (-) True LOC122326019
XM_043220694.1 mRNA upstream 208538 13153506 ~ 13155476 (-) True LOC122326020
XM_043221697.1 mRNA upstream 298359 13243327 ~ 13245313 (-) True mrpl22
XM_043222132.1 mRNA upstream 314225 13259193 ~ 13263225 (-) True cnot8
TU215551 other downstream 524753 12374846 ~ 12375545 (-) True G145910
XR_006247557.1 other downstream 587426 12312799 ~ 12312872 (-) True LOC122327024
XR_006247556.1 other downstream 587650 12312575 ~ 12312648 (-) True LOC122327023
XR_006247555.1 other downstream 587872 12312353 ~ 12312426 (-) True LOC122327022
XR_006247554.1 other downstream 588095 12312130 ~ 12312203 (-) True LOC122327021
TU215842 other upstream 138156 13083124 ~ 13083494 (-) True G146159
TU215845 other upstream 155222 13100190 ~ 13101076 (-) False LOC122326016
TU215846 other upstream 155222 13100190 ~ 13101243 (-) False LOC122326016
XR_006247558.1 other upstream 500110 13445078 ~ 13445207 (-) True LOC122327025
TU216130 other upstream 921447 13866415 ~ 13867613 (-) True LOC122326201

Expression Profile