RNA id: XR_006247558.1



Basic Information


Item Value
RNA id XR_006247558.1
length 130
RNA type guide_RNA
GC content 0.47
exon number 1
gene id LOC122327025
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 13445078 ~ 13445207 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTGGTTAACCTACTGTTGCTGCAAGATTGAGTAGTGTTTTGCAGTATTTGGTACCACACAGAGCGAGTTTGGTTCCTGCCGACAGGGCCTGTCAAGTTATTGGGTTCTCTGTGCGATGGTTCCATACAAA

Function


GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU215838 lncRNA downstream 382345 13062086 ~ 13062733 (-) True G146155
TU215836 lncRNA downstream 383456 13060420 ~ 13061622 (-) True G146153
TU215834 lncRNA downstream 385049 13059731 ~ 13060029 (-) True G146151
TU215833 lncRNA downstream 389904 13054953 ~ 13055174 (-) True G146150
TU215828 lncRNA downstream 395216 13049324 ~ 13049862 (-) True G146145
TU216020 lncRNA upstream 139247 13584454 ~ 13584797 (-) True G146284
TU216051 lncRNA upstream 237830 13683037 ~ 13685204 (-) True G146312
TU216135 lncRNA upstream 354129 13799336 ~ 13799571 (-) True G146373
TU216140 lncRNA upstream 373897 13819104 ~ 13823309 (-) True G146378
TU216310 lncRNA upstream 639299 14084506 ~ 14088182 (-) True G146468
XM_043222131.1 mRNA downstream 9756 13422174 ~ 13435322 (-) True zgc:77151
XM_043220894.1 mRNA downstream 26795 13356180 ~ 13418283 (-) True dbn1
XM_043221947.1 mRNA downstream 138185 13304660 ~ 13306893 (-) True nop16
XM_043221415.1 mRNA downstream 145282 13263574 ~ 13299796 (-) True wwc1
XM_043222132.1 mRNA downstream 181853 13259193 ~ 13263225 (-) True cnot8
XM_043221540.1 mRNA upstream 30665 13475872 ~ 13486830 (-) False fgfr4
XM_043221541.1 mRNA upstream 30665 13475872 ~ 13486830 (-) False fgfr4
XM_043221539.1 mRNA upstream 30665 13475872 ~ 13486830 (-) True fgfr4
XM_043221427.1 mRNA upstream 106092 13551299 ~ 13555713 (-) True rab24
XM_043220814.1 mRNA upstream 141103 13586310 ~ 13589633 (-) True rbmx2
TU215846 other downstream 343835 13100190 ~ 13101243 (-) False LOC122326016
TU215845 other downstream 344002 13100190 ~ 13101076 (-) False LOC122326016
TU215842 other downstream 361584 13083124 ~ 13083494 (-) True G146159
TU215551 other downstream 1069533 12374846 ~ 12375545 (-) True G145910
XR_006247557.1 other downstream 1132206 12312799 ~ 12312872 (-) True LOC122327024
TU216130 other upstream 421208 13866415 ~ 13867613 (-) True LOC122326201
TU216432 other upstream 773404 14218611 ~ 14222673 (-) False dynll2b
XR_006247436.1 other upstream 777936 14223143 ~ 14227266 (-) False srsf1b
TU216464 other upstream 814478 14259685 ~ 14263667 (-) True G146556
TU216757 other upstream 1470771 14915978 ~ 14920398 (-) False stc2b

Expression Profile