RNA id: TU239416



Basic Information


Item Value
RNA id TU239416
length 218
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G161668
representative True

Chromosome Information


Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 8474490 ~ 8474707 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTAATAATCACTTCCtagtatatttacagtatactAATTACCAGTGTTTAACGACACATTTAGTATTAAcagttttttaatgtgttatggTTAAAGGTTTTTCTTTGTGGTTATACAAATTGAAGTAGACAGAATTACAAGTTCTCTATAGGTAACAGACTCTTCTACTCAAGagccatgctgttgtaatagctgcagtatgtgcctttgcattgtcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU239407 lncRNA downstream 110499 8363510 ~ 8363991 (-) True G161661
TU239328 lncRNA downstream 267822 8203945 ~ 8206668 (-) True G161603
TU239311 lncRNA downstream 391623 8038760 ~ 8082867 (-) False LOC122330139
TU239313 lncRNA downstream 407907 8064731 ~ 8066583 (-) True G161591
TU239275 lncRNA downstream 440809 8033451 ~ 8033681 (-) True G161558
TU239418 lncRNA upstream 1466 8476173 ~ 8476475 (-) True G161670
TU239419 lncRNA upstream 2012 8476719 ~ 8477053 (-) True G161671
TU239442 lncRNA upstream 59261 8533968 ~ 8534191 (-) True G161687
TU239495 lncRNA upstream 319194 8793901 ~ 8795837 (-) True G161725
TU239506 lncRNA upstream 412241 8886948 ~ 8887214 (-) True G161734
XM_043225730.1 mRNA downstream 10990 8458635 ~ 8463500 (-) True slc35g2b
XM_043226538.1 mRNA downstream 19365 8423892 ~ 8455125 (-) True nck1b
XM_043226539.1 mRNA downstream 41433 8423892 ~ 8433057 (-) False nck1b
XM_043226532.1 mRNA downstream 74075 8311224 ~ 8400415 (-) False sugct
XM_043226536.1 mRNA downstream 74075 8311224 ~ 8400415 (-) False sugct
XM_043225798.1 mRNA upstream 21165 8495872 ~ 8499322 (-) True idi1
XM_043225790.1 mRNA upstream 55401 8530108 ~ 8669130 (-) True adarb2
XM_043226044.1 mRNA upstream 398799 8873506 ~ 8880132 (-) True klf6a
XM_043226900.1 mRNA upstream 578078 9052785 ~ 9055405 (-) True fzd8a
XM_043226915.1 mRNA upstream 744117 9218824 ~ 9223818 (-) True cpb1
TU239150 other downstream 1067807 7390095 ~ 7406683 (-) False pard3aa
TU238971 other downstream 1377651 7090532 ~ 7096839 (-) False ralaa
TU238949 other downstream 1469082 6945186 ~ 7005408 (-) False G161327
TU238957 other downstream 1506891 6945186 ~ 6967599 (-) True G161327
TU238790 other downstream 2004389 6396171 ~ 6470101 (-) True G161224
TU239703 other upstream 1456588 9931295 ~ 9932802 (-) True G161893
TU239863 other upstream 1806090 10280797 ~ 10286608 (-) True G161992
TU239881 other upstream 1921377 10396084 ~ 10413468 (-) False myo3a
XR_006247939.1 other upstream 1976852 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other upstream 1979291 10453998 ~ 10458476 (-) False zgc:174877

Expression Profile