RNA id: TU239419



Basic Information


Item Value
RNA id TU239419
length 335
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G161671
representative True

Chromosome Information


Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 8476719 ~ 8477053 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCGTACCCTTCCTGGCAGGAGATGCGCTGCGAACTCTTTGCTGGCAAACCTCTTGGTTGACAACTACGACAGACTAAAGGAGGAGATATTGGCTCAGACTGGTCCACCTGGTGTGTGGCCTACTTTCATGCCCGCCATACTTTTATTCTAGTTTGTATCCAGGCAATTGTTGCCATCTGTGCATTGATAAAGTGGGTAATACTTCTTGTTAGTTAAATTGCTAAGACCACGACCCCAGACTTAATAATCGAGGTGAGGATCACAGAAGCTGGACAGCCAATAAGAGATTGAAGGGGTCCGTGGCACTGGTCCTCGTGGATGAACAAATGCCTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU239418 lncRNA downstream 244 8476173 ~ 8476475 (-) True G161670
TU239416 lncRNA downstream 2012 8474490 ~ 8474707 (-) True G161668
TU239407 lncRNA downstream 112728 8363510 ~ 8363991 (-) True G161661
TU239328 lncRNA downstream 270051 8203945 ~ 8206668 (-) True G161603
TU239311 lncRNA downstream 393852 8038760 ~ 8082867 (-) False LOC122330139
TU239442 lncRNA upstream 56915 8533968 ~ 8534191 (-) True G161687
TU239495 lncRNA upstream 316848 8793901 ~ 8795837 (-) True G161725
TU239506 lncRNA upstream 409895 8886948 ~ 8887214 (-) True G161734
TU239509 lncRNA upstream 416095 8893148 ~ 8893367 (-) True G161737
TU239527 lncRNA upstream 554165 9031218 ~ 9033572 (-) True G161751
XM_043225730.1 mRNA downstream 13219 8458635 ~ 8463500 (-) True slc35g2b
XM_043226538.1 mRNA downstream 21594 8423892 ~ 8455125 (-) True nck1b
XM_043226539.1 mRNA downstream 43662 8423892 ~ 8433057 (-) False nck1b
XM_043226534.1 mRNA downstream 76304 8359212 ~ 8400415 (-) False sugct
XM_043225798.1 mRNA upstream 18819 8495872 ~ 8499322 (-) True idi1
XM_043225790.1 mRNA upstream 53055 8530108 ~ 8669130 (-) True adarb2
XM_043226044.1 mRNA upstream 396453 8873506 ~ 8880132 (-) True klf6a
XM_043226900.1 mRNA upstream 575732 9052785 ~ 9055405 (-) True fzd8a
XM_043226915.1 mRNA upstream 741771 9218824 ~ 9223818 (-) True cpb1
TU239150 other downstream 1070036 7390095 ~ 7406683 (-) False pard3aa
TU238971 other downstream 1379880 7090532 ~ 7096839 (-) False ralaa
TU238949 other downstream 1471311 6945186 ~ 7005408 (-) False G161327
TU238957 other downstream 1509120 6945186 ~ 6967599 (-) True G161327
TU238790 other downstream 2006618 6396171 ~ 6470101 (-) True G161224
TU239703 other upstream 1454242 9931295 ~ 9932802 (-) True G161893
TU239863 other upstream 1803744 10280797 ~ 10286608 (-) True G161992
TU239881 other upstream 1919031 10396084 ~ 10413468 (-) False myo3a
XR_006247939.1 other upstream 1974506 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other upstream 1976945 10453998 ~ 10458476 (-) False zgc:174877

Expression Profile