RNA id: TU61383



Basic Information


Item Value
RNA id TU61383
length 394
lncRNA type inter_gene
GC content 0.58
exon number 2
gene id G41490
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 611972 ~ 613737 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCGTGCTTTAATGTCGCGGTGATCCAGCGGTGCGTGCTCAGCCACTGACAGACACAGTGCGCGCGGACTCTCCAGCTCACGCGCGTCTTTATTGTCCGGAGAGGCGCGTCATTAGAGCGTCACGCCCACGCGCGCGTGAAGAGCTCGCGGACACGTACCGGCTCCGTGTTATTACACTGGAGAACTGTATTGCAGGAATGGTCCCCGCTCCGTCCTGGGGGGCTAGTGGTGGGTTTCACGCTGCTTTCGTGGCTTTGGGCACACGCTTTTTTCCCACCAATGACAGGCGCCTCAGACCGAGTGCTTTCACAGTCTCCACCAATCACAGACGAGCAGCTGTGACCAGAACTGCTAAAGCAACTAACACTTTCTCCTGAGGACACCGAACTCTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU61359 lncRNA downstream 44168 513802 ~ 567804 (-) True G41478
TU61342 lncRNA downstream 218780 391418 ~ 393192 (-) False LOC122346746
XR_006251236.1 lncRNA downstream 400925 208054 ~ 211047 (-) True LOC122347556
TU61325 lncRNA downstream 532531 77927 ~ 79441 (-) True G41455
TU61452 lncRNA upstream 163678 777415 ~ 833159 (-) True G41530
TU61489 lncRNA upstream 293311 907048 ~ 908023 (-) True G41563
TU61514 lncRNA upstream 411265 1025002 ~ 1025752 (-) True G41580
TU61516 lncRNA upstream 469022 1082759 ~ 1083148 (-) True G41582
TU61517 lncRNA upstream 470061 1083798 ~ 1084177 (-) True G41583
XM_043242199.1 mRNA downstream 57800 461935 ~ 554172 (-) False dlgap4b
XM_043242197.1 mRNA downstream 57800 461935 ~ 554172 (-) False dlgap4b
XM_043242195.1 mRNA downstream 57800 461935 ~ 554172 (-) False dlgap4b
XM_043242196.1 mRNA downstream 57800 461935 ~ 554172 (-) True dlgap4b
XM_043242198.1 mRNA downstream 57801 461935 ~ 554171 (-) False dlgap4b
XM_043241206.1 mRNA upstream 15140 628877 ~ 637760 (-) True vstm2l
XM_043241207.1 mRNA upstream 15140 628877 ~ 637756 (-) False vstm2l
XM_043242676.1 mRNA upstream 34855 648592 ~ 656610 (-) True LOC122347424
XM_043241598.1 mRNA upstream 45680 659417 ~ 665354 (-) True LOC122346747
XM_043242675.1 mRNA upstream 57004 670741 ~ 677943 (-) True LOC122347422
TU61311 other downstream 198419 225710 ~ 413553 (-) True G41443
TU61336 other downstream 436777 173968 ~ 175195 (-) False LOC122346743
TU61334 other downstream 447915 163323 ~ 164057 (-) False LOC122346743
TU61792 other upstream 1089096 1702833 ~ 1707408 (-) True G41781
TU62012 other upstream 2226925 2840662 ~ 2843258 (-) True G41955
XR_006251230.1 other upstream 2478803 3092540 ~ 3107897 (-) False cep170ab
XR_006251231.1 other upstream 2481053 3094790 ~ 3107897 (-) False cep170ab
XR_006251245.1 other upstream 3030529 3644266 ~ 3644404 (-) True LOC122347626

Expression Profile