RNA id: XM_043242195.1


Basic Information

Item Value
RNA id XM_043242195.1
length 6773
RNA type mRNA
GC content 0.53
exon number 14
gene id dlgap4b
representative False

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 461935 ~ 554172 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctcagtgttcGTGTCGCTCTCCTCGCGGATGAATCTCGCAGGGATGGAGATCAGAGTGGCTCGTTTTCGCGTTCGCCGGAGATAAAGTGATTTTAAGGAGAAATGCGGCGTGTTTCGCGTGCTGAAGATCTCACACACCGCCGGTCCTGAGCTCGCGTTGAGACGAGGAGCGGCGCTGGGAAGTTTAATGCTCCTCAAGAGCGACCATCTGAGGAGATTTCACCTGCTGGTTTTGGCGCACAAAGTTAGGATGACCTACAAATGGTGTCTGTTTCTCCCCGCTGGGCTCATGCTCCTGAACTAGGGTGGGGGGGTGTCGCCCCGTTCTGCCATGAAAGGCTACACCCCCCAGCGCACCCGTCACCTGTCCGAGTGCGAGCCGCCCCGTTCTCCCAGTCACCGGGAGCCTCTGTACCCCCCCTCCGCCTCCTCCACCCTGTCCCACGCCCCGTTCCTCCTCCCAGCAGCCATGGAGCACTACGGAGCCCTGGACCCGCACCACTTCTCCCCGACGCCCGACTGCCTGATGCCCCTCAACAACCAGCTGTCCTCCAGCAGCACCTTTCCCCGGATCCACTACAACTCCCACTTCGACCAGGGAGACTTCGGGCCCGGGGCCGACAGCATTGGGGGGATCAGCACCGGGACACTGGGGACGTCTATGTCCATGGGCATGGGTCTCGGAGTGGGACGGACCGCCATGATCACCAGCGGATCCGCAACTATATCAGGAGCAGGAAAGATGAACCGGTTGCCTCCTAACCTCCTGGACCAGTTCGAGAAACAGCTTCCGGGTCAACCGGACGGCTTCAGCACGTTGCAGTTCCATCGAAGCACCGCGGTGACGACGACcaaacagcagcaacagcagcgcACCGACAGCCCGGGAAAAATACGCTACCTAGTTCACTCTGTCCAGAAACTGTTCGCCAAATCCCAGTCGCTGGAAAACTCCGCCATCAAGGGAAACATGAACGGCCGGAACAGCCGATCGTCGAGCAGCGATGACAAACACCATCGGAGCAAAAGCAAAGACCGAGCGAAGAGCGAAGGGACGGCCAAACGGAGGCCACGGTCCAACATGTCCGGATACTGGAGCTCTGACGATTTGGACAGTGATATTAGCAACTATAGGAACCCGATGGCCATGATGACTTTGGGTCGGCCAGCGGTGGGATCCGGACCGGGGCCGGACGGACAGGTGGCATCCAGGTACTTCATGCAGGGCTACAGCACCATGAGCGAGCACACGCTCAAATCCTCGAAGAGTAACAGTGACCTGAAGCACCAGGGGCTCCCTGCACTCCCGGGGCCAGGCGGCGGTGGCATCGGAGGAGGCCGAGGGCCGATGTTTGACGGGAACTTTAGTAAAGGAGGACCCTGGTCCACGCTTACGTTAGGACCCACCAGACAGGTGTGCCAGAAGGGCTCGGCCACGCTGGACCGCACCCTGCTGAAGTCCAAATCTGTCCAGCAGGATCTGGGCTGCCACTTCCTGCAGGTGCGCGGGAGGATGCCCTCCACTGGTGACTGGACGGGGACTCTGGGCCGAAGCGGGCCCATGGGCGAGATCCCTTGTAGACGGATGCGTAGCGGCAGTTACGTCAAAGCCATGGGCGACCTCGAGGACAGCGACGACTCCGACGGGAGTCCCAAACCCTCGCCCAAGAGCGCCGCTCGGAGACAGAGCTACTTACGCGCAACACAGCAATCACTAAGTGACCAGTTCCCCTCAAGAAACCGTCTGCTGGACTACTCGATGCTGCAGGGGGACCTGGAGGCTCTCTGGTCCCCCCTCCACAGCATCAGCACCCTGCAGCAGATCGGACGCTCTGTCAGCTGTCTTCCTTCTCTGCGAGAGTTCTCTGGGAATCGCAGCCTGGATAACCTGGACTGCATCGGAGGCAGTTCTCCGTTCCCAAACTGGGACGATGATGACTTCAGTCAGGGCTGCAGCACGCTGGGACGAGGCAGCTGCATCAGTCAGGTGCGAGACATGGAGTTGAGCCAGCATTACGGAGACGAGCTGGACGACATGCATCTTCACTCGCGCTGCAGCGAGCCTCCCGACATGCCCATGCCCACGTGCTTCCGCTCACGCAGCCATAGTTACCTTCGTGCCATCCAGGCCGGCTGTTCTCAAGACGACGACACGGCCTCCATGGATTCTGATTCCCCGCCTCCCACGACCACCACCACCGTCCGCACCTACAGCAACAGCACCGTCTCCACGTGTATGACCACCTGTAAGAAGGTGGCTCCGCCCCCCGTACCTCCTCGAACCACCTCCAAACCCTTCATCTCCGTCACCGTTCAGAGCAGCACCGAATCCGCTCAGGACTGCTACCCCGACCCTCACGACCGCAAGAGCGAGGCCAACAGCCAATCGGGGCGCAGCAACTCCTCCGACAGCCTCGACAGCCTAGCCAAAGGGTCGCGACCCCAGCTTCCCGTAGCTCCGCCCCGTGAACCCCAGATCCCGGCGGCCGTGGTCATCTCTCCCAGCCCGCTCCGAGAGTCCCATCATGAGCAGGTGAAGGGGGAGGCGCTCGCCGCGGACGAACCCCCCGCAGACCCCGTCCCGAGAAGAAAGCTCTCCTCCATCGGGATTCAAGTGGACTGTATTCAGGAAATCCAGGCTAAGGTCGAGACGCCGCCGCTGGCCAGGTTCCAGTCGATCGGTGTTCAAGTGGAGGACGGCTGGACttTCAGCCGCTCCAGTAGTATGGCCTCTCGGCAAGAGACGGACTCAGACACACAAGATCTCTCGCTCACATCGCTAACATTCCCGTCCAACTCCAAGCACGCCGAGAAGAAAGTCATGGTCAACAGCGCCAGCCAATCGGTGGACTCGCCTCCGCAGCTCTCCCTCGACAACGGTAACCATGACAACGACGTGGCGGTGACGACCAGCGGCCCCTCCCGACAGATCCTGACCAACCGCTCGACCACGCAGAGCAGCTCCTCGTCCTTCTCCGAGAGCCTGGATCCGGCCCTCGACCCCTCGTCCCTCCCGCCGCCCGACCCCTGGCTGGAGAGCGGGAACGGGACGGGGAACGGGGGCCCCTCCCAGCCGCTGACGGGGGCCACGGGGGCCGCAGCGTGCCGGCGGGACGGTCACTGGTTCCTGAAGCTCCTGCAGGCCGAGACGGGACGGATGGAGGGATGGTGCAGTCAGATGGAGAAAGAGACCAAAGAGCACCAGCTCTCAGAGGAGGttttGGGGAAGGTCCGGACCGCGGTGGGCTGTGCTCAGCTCCTCATGTCCCAGAAGTTCCAGCAGTTCAGAGGCCTGTGTGAACAAAACCTGAATGTGAACGCAAACCCCAGACCCACGGCTCAAGATCTGGCTGGGTTTTGGGATCTTCTTCAGCTCTCAATAGAAGACATCAGCCTCAAGTTTGACGAGCTTTATCATCTCAAATCAAACGACTGGAAGCTGGAAGGAGACTCACCGGAGAAGCAGGAGAACCAGAAGCAGGCTCCACCGGTGCCCAAGAAGCCTGGGAAGAGTAAAGCGGCCCTGGGCCGAGAGAAGAGCAACGACTCGGTGGACAAACAGAGACAGGAGGCTCGCAAGCGGCTCATGGCGGCCAAGAGAGCTCAGTCCGTCAAGCAGAACTCTGCCACCGAGAGCGCCGACAGCATCGAGATCTACGTCCCCGAGGCTCAGACGCGGCTCTGAGGAGATGCACAAACCAGCTCAAGGGCTCCGGCGTCGCTCAACACCAAAAGCTGCTTTCAACGGCGAGAGGGTCGAGGGACGAGGACGGAAACGAACAGTGAGAACAGACTGCCAAGGAAAACCTCACAACCAATCTTATTAGTCGCGATTTAATAATGTTATCGGTATGATAATTAATATGGGACCGCTGTCGATTACGATTACCGTCCTAAACTCTATCagattgttttaattgtttcgGATAAGAACTCCTGTATCGTAGAAACAAGCCCGCCGCCCGCGTCTTTCCCCGCTGGAATCCACGTCTTCCCGTCACACGCTTCTCTTTCCGTTCTCCTTCCTCCCCCTCGCCCCGTCTTTCGGTAACGGTCCGGAGGGACGCAAGCGATGGAGACGTCCGTGATCGGCGGACGCGGGGCGTTTCAGGGCAGGCAGGTGGCGCTCTTCCGCGTCTCTGCGTTTATTAATCATGCGTTCGTTGCATATCCGATGAAAGCTGCCTGCGTCTCAGGTCCTGAAGTCTCGCGGTTGTCCAGCTCTCGTGAGTTTAAACCagcgctgtcaaacgattaatcttTGAGTACCGAGTGCATTTATTATGCGTACAGATCTCCCGTCTAAACTCCTCTTTCACTATTGCAAAAcggagaaaaaacattttatatttaaaattttcttatTTGTAAAACACACAGATGTGTCAAGCGCcgtttaaaatcacaattgaaattaaaaacttGCTCAAAACAACATTCGGGATTAAACGGGTAGACTTCATGACATTTATGACACTGACTTATTAAATAAAGCTGTTGTTATATCTATGTATTTGTGTGAATAAATGTACGTTTAtatcatttgcattatttagaCCGAACACACAGACGTTTACGTCgatgattaatcgtttgacggcACTGCTTTAAACCGGTTCCCATCCTAACAGTGTTCTGCTTTGAGGAAAGCAACCTAACCTGATGTTTTATTGAATGAAGTGCCTGTGGATCATTATTGTGGGTAACTTTACGACCCTCGTAGCAATATCAAAGATTATAATACCATGATTTAATCAGCGCTCCCTAAAACACGTAGTGTAGACGGCGTGATGAAACTTAAGAGCTAAATAggattctttctttcttttcgtCGTGCGCTTTCTCTTTCTGCACACATCTGTACTCGTCACTCCTCGccatttttcccatttttaGTCCTGTTAGTCATTCAGGGAGTGTTTTAAACTCTTGACGCGGTCTTTAATGGGAGCTTTCACCAATGCGAAGAATTATGCGAtaagagaaatacaaaaaatacacatttgatgCAGTTCATTTTGAAAAAGCATCTTTGTGCAAtgttttgcttagttttttttttaccaaaagtggtgagatttgttttaaatgtattataaaactGCAAATTAAGAAATCTTACCTACATATTCTAATGTTAATGCGGTTTTAATAACTCCGTCCTTTATATACTTAATGTGGCTTAATCTAACATACTGCGTGTTTCTTATTGCACTGCCGTTAACAagtttgggcatgattttttttttccgtgttTTACGTCTCCAAGGCCGCATGCGTtcgatcaaaaaaaaaacattcaatttgTACAATATCCTCACACTTTAAAAAGCCGTTTTCTATGTTCAAATGTAATtcactgaattttcagcatcgctGCTCCAGTCAGAAACCATTCCAAGCATTTCTGATCGTCGGTGTTGAAAACAAATACGCCGGCTAATATTTTTGCGCAAACGgtgacactttttattttttcaaaacgtTCAGAAGAATAGCGTTTGCTTGGTCCCTTCTCGATCGAACTGACCCCCGACTTTTTAATCGTACGCTCACGAACGCTTGCGGCCCTGCATTCAGGGGCAAATGTCTCCAGACCGCCGCTGATTGGCCGTCGCCGCGCGTCTTTGGGCTAATGATGGTGTGAACTGCGCGTCTTCAGTCTGCGGCCTCTCCCGGTCGTTCCCTCCATTCTGTGTCGCCCGAGTCGTTGACGCCTGCTCAATGTCCTGAAAACGTCTGACAGACATCAGGATCACGTGAAGGAGTATTTAAGCGCTGCTCATATTTTGATCTCTTAACCTTACACCAGCCTGCGGTACTACTCCCCCAGTTCAACCTGCAGAGATAAGCACAACGATCCCACTAAGATGTATGAATAGAATTTGGCTAAAAAACGATttgtatatattctatatttcgAGGTGCATCGTGACGGTGCCTTTTCAAGtcgttttatttatgcattttttaagagTCGCAGTCGTTTTGTaggaatgaaaatgattttgggAGCAACCGAGGCAAACCCCCAGACGggaaaaaatgagaaataaactgCTGAAAcgagcattttcaaaataaaacgcAAACAAAATCGTAAAGGTGGGTGCCCTTTACATCCGACGTTTTAttcgattttatttttatgagcgGTGTTTCACCAAACACATCATTCTGAGTCACCAGGGATTCATTCTGTTCAGGGATTGGGTTTAATTACTGTTTAACGGCTGAAGCGTGTGGAAACGTCGAGAATCGCTCTTTAGATACCAcattataatctttttttccttGAATCTGTCCGCCTGTGTTGTTCATTGCCCGGCGCTCCGGTGTGGTGAATCTGGTTTTCCCGGTCCCGTTTGATCTGGGTCGTGTTTTGTGGGCTTCCCTGAGGACGTGGATCTCCTCGGCACTGGATCTGGATCGCCTCTCTGTTCATGCTGCTTGGATACTAGATAAACTCTTTTCTACTCCTGTGAAGTGACTGAGCAGCGGCGAAGCACCGGACGTGACGCTCGCTCTTCAGCTGTGTTTTACTCGCTCCTGGGGGTCGTCGAACAATAAATCATCTAAATGCAAGAGTTTGTAGCAACAAgaattaagattattattattattataaagattgataatcaatattttatgaCACAAGCACATATTTTACTGACTAGGATTTGTTCAATATGTCTAATGCTATATGAAGTTTAGGCTGTGTATGTCAGGGTCTTTTGTTTAgtaagaaatacagtaaatctgAGTTAAGTTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU61342 lncRNA downstream 68743 391418 ~ 393192 (-) False LOC122346746
XR_006251236.1 lncRNA downstream 250888 208054 ~ 211047 (-) True LOC122347556
TU61325 lncRNA downstream 382494 77927 ~ 79441 (-) True G41455
TU61383 lncRNA upstream 57800 611972 ~ 613737 (-) True G41490
TU61452 lncRNA upstream 223243 777415 ~ 833159 (-) True G41530
TU61489 lncRNA upstream 352876 907048 ~ 908023 (-) True G41563
TU61514 lncRNA upstream 470830 1025002 ~ 1025752 (-) True G41580
TU61516 lncRNA upstream 528587 1082759 ~ 1083148 (-) True G41582
XM_043241853.1 mRNA downstream 1662 453003 ~ 460273 (-) False LOC122346944
XM_043241851.1 mRNA downstream 1662 453003 ~ 460273 (-) False LOC122346944
XM_043241852.1 mRNA downstream 1662 453003 ~ 460273 (-) True LOC122346944
XM_043242506.1 mRNA downstream 19155 431740 ~ 442780 (-) True zgc:123305
XM_043241450.1 mRNA downstream 31556 427056 ~ 430379 (-) True trim107
XM_043241206.1 mRNA upstream 74705 628877 ~ 637760 (-) True vstm2l
XM_043241207.1 mRNA upstream 74705 628877 ~ 637756 (-) False vstm2l
XM_043242676.1 mRNA upstream 94420 648592 ~ 656610 (-) True LOC122347424
XM_043241598.1 mRNA upstream 105245 659417 ~ 665354 (-) True LOC122346747
XM_043242675.1 mRNA upstream 116569 670741 ~ 677943 (-) True LOC122347422
TU61311 other downstream 48382 225710 ~ 413553 (-) True G41443
TU61336 other downstream 286740 173968 ~ 175195 (-) False LOC122346743
TU61334 other downstream 297878 163323 ~ 164057 (-) False LOC122346743
TU61792 other upstream 1148661 1702833 ~ 1707408 (-) True G41781
TU62012 other upstream 2286490 2840662 ~ 2843258 (-) True G41955
XR_006251230.1 other upstream 2538368 3092540 ~ 3107897 (-) False cep170ab
XR_006251231.1 other upstream 2540618 3094790 ~ 3107897 (-) False cep170ab
XR_006251245.1 other upstream 3090094 3644266 ~ 3644404 (-) True LOC122347626

Expression Profile