Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU17388 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G12950 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 23091632 ~ 23091832 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0023014 | signal transduction by protein phosphorylation | biological_process |
| GO:0000165 | MAPK cascade | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU17344 | lncRNA | upstream | 109253 | 22982180 ~ 22982379 (+) | True | G12907 |
| TU17065 | lncRNA | upstream | 121538 | 22897811 ~ 22970094 (+) | True | G12702 |
| TU17057 | lncRNA | upstream | 157421 | 22887346 ~ 22934211 (+) | True | G12694 |
| TU17073 | lncRNA | upstream | 169776 | 22921578 ~ 22921856 (+) | True | G12710 |
| TU17041 | lncRNA | upstream | 176990 | 22861601 ~ 22914642 (+) | True | G12680 |
| TU17391 | lncRNA | downstream | 912 | 23092744 ~ 23093164 (+) | True | G12953 |
| TU17420 | lncRNA | downstream | 116060 | 23207892 ~ 23209292 (+) | True | G12977 |
| TU17435 | lncRNA | downstream | 292300 | 23384132 ~ 23385347 (+) | True | G12992 |
| TU17442 | lncRNA | downstream | 356161 | 23447993 ~ 23448272 (+) | True | G12999 |
| TU17454 | lncRNA | downstream | 410783 | 23502615 ~ 23510082 (+) | True | G13008 |
| XM_022675183.1 | mRNA | upstream | 477123 | 22533679 ~ 22614509 (+) | False | LOC103038567 |
| XM_022675203.1 | mRNA | downstream | 56179 | 23148011 ~ 23500229 (+) | True | LOC103034742 |
| XM_022675217.1 | mRNA | downstream | 464885 | 23556717 ~ 23637004 (+) | False | cbl |
| XM_022675213.1 | mRNA | downstream | 464886 | 23556718 ~ 23638212 (+) | True | cbl |
| XM_007258871.3 | mRNA | downstream | 653352 | 23745184 ~ 23750130 (+) | True | rnf26 |
| XM_022675324.1 | mRNA | downstream | 804660 | 23896492 ~ 23909676 (+) | True | LOC103047782 |
| TU16886 | other | upstream | 578996 | 22473652 ~ 22512636 (+) | False | oaf |
| TU16874 | other | upstream | 706660 | 22329719 ~ 22384972 (+) | False | spa17 |
| TU16873 | other | upstream | 750119 | 22329719 ~ 22341513 (+) | False | spa17 |
| TU16611 | other | upstream | 1627983 | 21459850 ~ 21463649 (+) | True | G12362 |
| trnan-guu | other | upstream | 2115355 | 20976204 ~ 20976277 (+) | True | trnan-guu |
| TU17542 | other | downstream | 762166 | 23853998 ~ 23855353 (+) | True | G13067 |
| TU17745 | other | downstream | 1622519 | 24714351 ~ 24717226 (+) | False | ccdc9 |
| TU17747 | other | downstream | 1624058 | 24715890 ~ 24717226 (+) | False | ccdc9 |
| TU17784 | other | downstream | 1764101 | 24855933 ~ 24857022 (+) | True | G13237 |
| TU18064 | other | downstream | 1960681 | 25052513 ~ 25056103 (+) | True | G13445 |
