cbl (cbl)


Basic Information

Item Value
gene id cbl
gene name cbl
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 23556717 ~ 23638212 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022675213.1
GGCTGAACAGGAACAGCACTGCGACCAACGCGGGAGGGGGGCGCGCAGAAGGCGGTGTTTATTTCTcctaatacatttatttatttcttcttttcttcctttccCCCGAGGTTTACTCGCTCGGCTGTTTAGATTGTGTACAGTAAGCCGAGGCGCGGCGATCGGCTCTGCAGCGTACCCGCTCCGCCTCGCGGTGAACTTCCCTTCGCGAGACCCTcggtggaggagagagagggtcGGGGGGAGGGAACAGGAACGGTTGCAGCACGCAGGGTGTCGGTGCGAAAGCCAGTTGATTCTTGGTAGAAAAAAGAAGTCGTGACATCCCTGAATTTAACACACACCAACATCTCGAGCAGAGCTTCGTTTCCTCCGTGCGGCGTCCCTGCGCTAGCTGCTGGCAGAGCGATGACGGTGCGGTCCGCTGCAAGGAGCGGGGATTTAATGGGAGCCTCCCGGCGGTAGAGCCTTTCTCTCCCGCCTGCCTCCATCCAACACCCCCAGCACCCCCTCCCGACCACGGACCCTAGCTCGGACTCAGCCCGGGCTCTGCTGTCCTCACCGGGGGGTGATCAAGGCACAGCAGCCTCTTGACCACGGAAGGAATCAGGGAGGGAGGTCGATCGGTCGGTCGGTCCCCCTCCGCCGCACCACCAGGGTCTCGACCTGTCGCTGTGTCCGACTTCGTGGAGCCAAAATATGTCAGGGAACAGTAAGAAAGGCGGTGGGCTCATCGGGATGATGAAGGACGCTTTTCAGCCTCACCACCATCTCCACCACTCCCATCACCAGCCCGGCGCCGTGGACAAAAAGACAGTGGAGAAATGCTGGAAACTAATGGACAAAgTGGTGCGATTATGCCAGAACCCCAAGCTGGCCCTCAAGAACAGTCCTCCATACATTTTAGACCTGCTTCCCGACACCTATCAGCATCTTCGCACCATCCTTTCCCGCTACGAGGGCAAGATGGAGACGCTGGGAGACAACGAGTACTTCCGTGTCTTTATGGAGAACCTCATGAAGAAGACCAAGCAAACCATCAGTTTGTTTAAGGAAGGGAAGGAGCGCATGTATGAGGAAAACTCTCAGCCCAGgcGGAACCTGACCAAGCTTTCGCTCATATTCAGCCACATGCTGGCAGAACTCAAAGCCATCTTCCCCAGCGGTCTGTTCCAGGGGGACAATTTCAGAATCACCAAGGCGGACGCAGCAGAGTTCTGGAGAAAATCATTTGGGGACAAGACTATAGTACAGTGGAAGATCTTCAGACAGGCGCTGCATGAATTCCACCCAATCAGCTCAGGGCTGGAGGCCATGGCCCTCAAATCCACCATCGACCTCACCTGTAACGACTACATCTCCGTGTTTGAGTTTGATATCTTCACCAGGCTCTTTCAGCCGTGGTCATCTCTACTGCGGAACTGGAACAGCCTTGCGGTGACTCACCCGGGGTACATGGCCTTTCTCACCTACGACGAGGTCAAGGCTCGCCTACAGAAGTTCATCCACAAACCTGGCAGCTACATTTTCAGACTGAGCTGTACTCGGCTGGGCCAGTGGGCCATCGGCTACGTTACTGCAGACGGAAACATCCTGCAGACCATCCCTCACAACAAGCCCCTCTTCCAGGCTCTCATCGACGGATTCCGGGAAGGATTCTATTTGTTTCCAGACGGCCGCACGCAGAACCCAGATCTCACAGGACTCTGTGAACCTTCACCACAAGATCATATCAAAGTCACACAGGAACAATATGAGCTCTACTGTGAAATGGGCTCCACCTTTCAGCTGTGTAAGATCTGCGCAGAGAACGACAAAGATGTGAAGATAGAGCCGTGTGGTCATCTGATGTGCACGTCCTGTCTCACTGCGTGGCAGGAGTCTGAGGGTCAGGGCTGCCCGTTCTGCCGCTGTGAGATTAAGGGTACTGAACCCATCGTGGTGGATCCTTTTGACCCAAAGGACAACAGCGGGGGTTCCTATGGTGGCTGCAGGGGGATGTTCGGAGCAGAAGGCGCCCCCTCCCCcagttatgatgatgatgacgacgaCCGACTAGAAGATCCTCACCTCATGATGAGCAAGCTGGCCTGTAGTAAAGTGGAAAGACCCCCATCACCACTTTCAATGGCTCCTCCCACCTCTCTGCCCCCTGTTCCCCCACGTCTAGACCTGCTGCAGCACCGACCACCAAATCCTCCAGGAGCCTCCAGTCCTGGAGCCACGTCCAAGGCTCCCTCCCATCACAAGGATAAGCCTTTACCGCTGCCCCCAGCCCTGCGGGACCTCCCCCCACCTCCTCCCCCGGACCGCCCGCACTCCGCAGGACCCGACAACCGGCTCCCGAGACGCCCCCTGCCCTGCACCCCCGGAGACCCGCCCAGAGACAAACTACCCCCGGCCCCACCCAACCGCAACATGGCGGACTGGAACCCTCGCCCGGTGCCCAAAGCTCCATCCCAGCCGCCCGCTGTCGGGGGCGAGACCCGCGGGTCACGAGAGCTCTCAAACCGCCACTCGCTCCCGCTGGCCCTGCCCTCAGCCATGGAGGCTCAGAGGAACAACAGCTCCGTCAGTCTGGATCACCAGCTGAGTTTTGGTGCATCAGCCTCTGGAGGGTCCGAATACGACAACCCAAAAGTGAAGCCGTCTGCCTCAGCTAATGCTATCTACGCCCTGGCAGCCAGCAGGGCACTTTCTGCAGTAAAGCAAGTGACGGGAGAAGACGGCTGTGAGAGTGATGAAGACTCCGACTACATGACCCCCAGCTCTCGCCCTGTACTGCCAACCATCAGTCCTTCTCTGGGGGAGGTAGTGCCCAGACCTCCCCAATCCAACTCCATCAATTCCAGGGGTTTGCTCAGTGATATGGACTCTGAGGGTCCTCAGATGTATGAAGCGATGTACAACATCCAGGCCCAGGCCCTCACAGCCTCTCAGCCTCATCAAGCCCGAGACTCAGATTACTCAGAGCTGCCTCCGCTGGCGAGCTCGAACGGACCGCGGGACTCTGAGTTTGAAGAAGAGGAGAACGGATACGACATCCCCAAACCCCCTCTACCTGTAGCCCGACGCACTCTCTCCGAGGTCAGCAGCTTATCCTCCGCCTTCAGCCGCATCTCTGTGGAGAGTGAGCCGGGAGCAGCAGTCTCGTTCGACTCAGTAGACGCTCCGGAGCGACCGCCCAAGCCTCTGCCCCGCCGgatcagctccgagcgccggcCCAGCCCGGTCCCACCCGGAGCCACCGCGGCGCCCCCCAGCAACCCCCAGATCAGCGGAGAGATCGAGCTGCTCATGAGCCAGGGCTACTCCTACCTGGACATCCAGAAAGCCCTGATGATCGCTCAGAACAATATCGAGATGGCCAAGAACATCCTGCGGGAGTTCGTCTCGGTGCCCTCCACGGCTCACATCTTCACATAGCGACCCCACAGCTACCACCTCACGCCACCACAGATACCGGACCGGAGAGTGCGTCCGGAACTCTCGCTCGCCCGCTTTTAGCTCTAGTGCCACGGagcctccctctcttcctcctcctcctcttcctcctcctcctcctcgcgtCTGTCCTTCATGTGTGAAGAACGGATCCGGCTCCGGCTCCAGAATCCGGCTACGGCGGAACAACCGCAGCCGCGGTGAAACTGCTGCATGTAACCCGAGGCTTTCGGAGAAGCTTGAGCGAGGACGAGATGATAaaactgttttgtgtgtgttttctatgataagttaataatatataagtgCGTATATTGATATAGTTAATATATACACGTGTAGGCTGGAGAGGGAGGAGCTAATGCAGACGTCAGGTGCGTCGGGGGGTGTAACGTGAGGCTGGGGAGGGCACAGGTGAGACTCTTCAGCCTGACCTGCTGCCGTGAAAAACTgcagctgaacttttttgcTGATGTCAAAAAATGGCCTTTCATTGTGTTGCTTTGGTACTTTCTCGAGATGTGTgcgtaatttttgtttttttgggtttttttttttgcagtcgtCATTGTTTTTCTAAAGTAGCATGGCATGAGGGACGGTCCCTTAGACCACAGTCAGCTAATTCTGCAGATTCCTGCGTTTAGATCTGTTCTCATTGGCCACCGATCTGAAGTTCCAGTTCCAGTGAAGCAGTGATCAGTGATGCTTTTCAGTCACTTCTCTgattcagttttcagtttttagttttagttttcttccctctgtgtctgtctgtctgtctgtaggaTCAGCGTCATTCTTTACTGCCTGAGTGTCATGTAGCATTACtgtaactaaactaaaaaacgaAACATTTAGCTAAAAAAGGACGTTTCTAGAAAACACAGGGTTAGACAGCGCAACCTCCTTCCACTCTGGTAAAAATATACGACGTTGTGATGGATCGTCAGAGAAGCTGCACCAGACATGAGAGTAATGTGAGGTTCTGAATTTCTTTCAATTTCTCTCATTTTTGCATGAAAAAGATGTAAACAAAGTGATTTAGAgtgctttaatgctttaatacGACAAGGTCAGACATCTAAGGGGTCATATTACACTTTTATTGTTAtcacaaatttattttttcacgATAAACAGGTCATAGGATCTATAAACTCAAATTTAAAATTACCCACATTCAGCAA
>XM_022675217.1
GGGCTGAACAGGAACAGCACTGCGACCAACGCGGGAGGGGGGCGCGCAGAAGGCGGTGTTTATTTCTcctaatacatttatttatttcttcttttcttcctttccCCCGAGGTTTACTCGCTCGGCTGTTTAGATTGTGTACAGTAAGCCGAGGCGCGGCGATCGGCTCTGCAGCGTACCCGCTCCGCCTCGCGGTGAACTTCCCTTCGCGAGACCCTcggtggaggagagagagggtcGGGGGGAGGGAACAGGAACGGTTGCAGCACGCAGGGTGTCGGTGCGAAAGCCAGTTGATTCTTGGTAGAAAAAAGAAGTCGTGACATCCCTGAATTTAACACACACCAACATCTCGAGCAGAGCTTCGTTTCCTCCGTGCGGCGTCCCTGCGCTAGCTGCTGGCAGAGCGATGACGGTGCGGTCCGCTGCAAGGAGCGGGGATTTAATGGGAGCCTCCCGGCGGTAGAGCCTTTCTCTCCCGCCTGCCTCCATCCAACACCCCCAGCACCCCCTCCCGACCACGGACCCTAGCTCGGACTCAGCCCGGGCTCTGCTGTCCTCACCGGGGGGTGATCAAGGCACAGCAGCCTCTTGACCACGGAAGGAATCAGGGAGGGAGGTCGATCGGTCGGTCGGTCCCCCTCCGCCGCACCACCAGGGTCTCGACCTGTCGCTGTGTCCGACTTCGTGGAGCCAAAATATGTCAGGGAACAGTAAGAAAGGCGGTGGGCTCATCGGGATGATGAAGGACGCTTTTCAGCCTCACCACCATCTCCACCACTCCCATCACCAGCCCGGCGCCGTGGACAAAAAGACAGTGGAGAAATGCTGGAAACTAATGGACAAAgTGGTGCGATTATGCCAGAACCCCAAGCTGGCCCTCAAGAACAGTCCTCCATACATTTTAGACCTGCTTCCCGACACCTATCAGCATCTTCGCACCATCCTTTCCCGCTACGAGGGCAAGATGGAGACGCTGGGAGACAACGAGTACTTCCGTGTCTTTATGGAGAACCTCATGAAGAAGACCAAGCAAACCATCAGTTTGTTTAAGGAAGGGAAGGAGCGCATGTATGAGGAAAACTCTCAGCCCAGgcGGAACCTGACCAAGCTTTCGCTCATATTCAGCCACATGCTGGCAGAACTCAAAGCCATCTTCCCCAGCGGTCTGTTCCAGGGGGACAATTTCAGAATCACCAAGGCGGACGCAGCAGAGTTCTGGAGAAAATCATTTGGGGACAAGACTATAGTACAGTGGAAGATCTTCAGACAGGCGCTGCATGAATTCCACCCAATCAGCTCAGGGCTGGAGGCCATGGCCCTCAAATCCACCATCGACCTCACCTGTAACGACTACATCTCCGTGTTTGAGTTTGATATCTTCACCAGGCTCTTTCAGCCGTGGTCATCTCTACTGCGGAACTGGAACAGCCTTGCGGTGACTCACCCGGGGTACATGGCCTTTCTCACCTACGACGAGGTCAAGGCTCGCCTACAGAAGTTCATCCACAAACCTGGCAGCTACATTTTCAGACTGAGCTGTACTCGGCTGGGCCAGTGGGCCATCGGCTACGTTACTGCAGACGGAAACATCCTGCAGACCATCCCTCACAACAAGCCCCTCTTCCAGGCTCTCATCGACGGATTCCGGGAAGGATTCTATTTGTTTCCAGACGGCCGCACGCAGAACCCAGATCTCACAGGACTCTGTGAACCTTCACCACAAGATCATATCAAAGTCACACAGGAACAATATGAGCTCTACTGTGAAATGGGCTCCACCTTTCAGCTGTGTAAGATCTGCGCAGAGAACGACAAAGATGTGAAGATAGAGCCGTGTGGTCATCTGATGTGCACGTCCTGTCTCACTGCGTGGCAGGAGTCTGAGGGTCAGGGCTGCCCGTTCTGCCGCTGTGAGATTAAGGGTACTGAACCCATCGTGGTGGATCCTTTTGACCCAAAGGACAACAGCGGGGGTTCCTATGGTGGCTGCAGGGGGATGTTCGGAGCAGAAGGCGCCCCCTCCCCcagttatgatgatgatgacgacgaCCGACTAGAAGATCCTCACCTCATGATGAGCAAGCTGGCCTGTAGTAAAGTGGAAAGACCCCCATCACCACTTTCAATGGCTCCTCCCACCTCTCTGCCCCCTGTTCCCCCACGTCTAGACCTGCTGCAGCACCGACCACCAAATCCTCCAGGAGCCTCCAGTCCTGGAGCCACGTCCAAGGATAAGCCTTTACCGCTGCCCCCAGCCCTGCGGGACCTCCCCCCACCTCCTCCCCCGGACCGCCCGCACTCCGCAGGACCCGACAACCGGCTCCCGAGACGCCCCCTGCCCTGCACCCCCGGAGACCCGCCCAGAGACAAACTACCCCCGGCCCCACCCAACCGCAACATGGCGGACTGGAACCCTCGCCCGGTGCCCAAAGCTCCATCCCAGCCGCCCGCTGTCGGGGGCGAGACCCGCGGGTCACGAGAGCTCTCAAACCGCCACTCGCTCCCGCTGGCCCTGCCCTCAGCCATGGAGGCTCAGAGGAACAACAGCTCCGTCAGTCTGGATCACCAGCTGAGTTTTGGTGCATCAGCCTCTGGAGGGTCCGAATACGACAACCCAAAAGTGAAGCCGTCTGCCTCAGCTAATGCTATCTACGCCCTGGCAGCCAGCAGGGCACTTTCTGCAGTAAAGCAAGTGACGGGAGAAGACGGCTGTGAGAGTGATGAAGACTCCGACTACATGACCCCCAGCTCTCGCCCTGTACTGCCAACCATCAGTCCTTCTCTGGGGGAGGTAGTGCCCAGACCTCCCCAATCCAACTCCATCAATTCCAGGGGTTTGCTCAGTGATATGGACTCTGAGGGTCCTCAGATGTATGAAGCGATGTACAACATCCAGGCCCAGGCCCTCACAGCCTCTCAGCCTCATCAAGCCCGAGACTCAGATTACTCAGAGCTGCCTCCGCTGGCGAGCTCGAACGGACCGCGGGACTCTGAGTTTGAAGAAGAGGAGAACGGATACGACATCCCCAAACCCCCTCTACCTGTAGCCCGACGCACTCTCTCCGAGGTCAGCAGCTTATCCTCCGCCTTCAGCCGCATCTCTGTGGAGAGTGAGCCGGGAGCAGCAGTCTCGTTCGACTCAGTAGACGCTCCGGAGCGACCGCCCAAGCCTCTGCCCCGCCGgatcagctccgagcgccggcCCAGCCCGGTCCCACCCGGAGCCACCGCGGCGCCCCCCAGCAACCCCCAGATCAGCGGAGAGATCGAGCTGCTCATGAGCCAGGGCTACTCCTACCTGGACATCCAGAAAGCCCTGATGATCGCTCAGAACAATATCGAGATGGCCAAGAACATCCTGCGGGAGTTCGTCTCGGTGCCCTCCACGGCTCACATCTTCACATAG

Function

symbol description
cbl Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Acts upstream of or within definitive hemopoiesis. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Used to study myeloproliferative neoplasm. Human ortholog(s) of this gene implicated in acute myeloid leukemia; juvenile myelomonocytic leukemia; lung non-small cell carcinoma; and myeloid neoplasm. Orthologous to human CBL (Cbl proto-oncogene).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase CBL

GO: NA

KEGG:

id description
K04707 CBL; E3 ubiquitin-protein ligase CBL

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022675213.1 True 4634 mRNA 0.55 16 23556718 23638212
XM_022675217.1 False 3409 mRNA 0.58 16 23556717 23637004

Neighbor

gene id symbol gene type direction distance location
LOC103034742 grik4,LOC108439963,LOC108277597 coding upstream 56488 23148011 ~ 23500229 (+)
LOC103038567 LOC108436528 coding upstream 942208 22533679 ~ 22614509 (+)
LOC103034910 tmem136,LOC108436527,LOC107709136,LOC107586230,LOC107657235,LOC107601721,LOC107696007,LOC107717274 coding upstream 1027434 22521242 ~ 22529283 (+)
LOC103038252 LOC108277474,LOC103353371,LOC107709113,LOC108436507 coding upstream 1121283 22406379 ~ 22435434 (+)
LOC103037938 LOC108436505,LOC108278373,LOC107601688,LOC107586299 coding upstream 1165716 22352369 ~ 22391001 (+)
rnf26 rnf26 coding downstream 106972 23745184 ~ 23750130 (+)
LOC103047782 phykpl,LOC108439974,LOC108277665,LOC107743705,LOC107683819,LOC107585546 coding downstream 258280 23896492 ~ 23909676 (+)
bcas3 bcas3,LOC107743646,LOC107664928 coding downstream 311179 23949391 ~ 24473546 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding downstream 848610 24486822 ~ 24495457 (+)
tbx4 tbx4 coding downstream 880950 24519162 ~ 24558604 (+)
LOC103032198 NA non-coding upstream 27728 23521951 ~ 23528989 (+)
G13008 NA non-coding upstream 46635 23502615 ~ 23510082 (+)
G12999 NA non-coding upstream 108445 23447993 ~ 23448272 (+)
G12992 NA non-coding upstream 171370 23384132 ~ 23385347 (+)
G12977 NA non-coding upstream 347425 23207892 ~ 23209292 (+)
G13043 NA non-coding downstream 72344 23710556 ~ 23724434 (+)
G13051 NA non-coding downstream 128273 23766485 ~ 23769612 (+)
G13065 NA non-coding downstream 202076 23840288 ~ 23843275 (+)
G13068 NA non-coding downstream 218779 23856991 ~ 23857360 (+)
G13069 NA non-coding downstream 219390 23857602 ~ 23857916 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 1038937 22473652 ~ 22517780 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other upstream 1171745 22300996 ~ 22384972 (+)
G12362 bco2b,LOC108436497,LOC107586303,LOC107657247 other upstream 2093068 21459850 ~ 21463649 (+)
LOC103033739 gkup,LOC108436512,LOC108278261,LOC106612544,LOC105024033,LOC107709108,LOC107717281,LOC107657260,LOC107586304 other upstream 2566653 20963049 ~ 20990064 (+)
G13067 NA other downstream 215786 23853998 ~ 23855353 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other downstream 1062630 24700842 ~ 24722676 (+)
G13237 NA other downstream 1217721 24855933 ~ 24857022 (+)
G13445 spcs2,LOC107677086 other downstream 1414301 25052513 ~ 25056103 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 1608784 25246996 ~ 25339435 (+)

Expression


Co-expression Network