G13051


Basic Information

Item Value
gene id G13051
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 23766485 ~ 23769612 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU17522
cctataacactactagcttcagctccgagcgccgccatcactgtactgataattaaattacattacattacattacatttggcagacgcttttgtccaaagcgacttacaatagtcaagtgataatgacatagacgtatatatacatagactctgcatagcctaCCTATGGTGCCGGCTGCTCCGCTATGCggaatctatatatatatgtcaatgttattatcagtacagtgatggcggcgctcggagctgaagctagtagtgttataggatgtaaacagtggtttttaataagcttcttctgctctccggattctagcaaggaggtgtgctattcatcaaagataagaactttttatcatgttttactacaacaaaatagcattttacaccagagttctcctttaattaataatattattgtaagtATTTTTCTTAATATGTAAAAACAAACTATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17522 True 459 lncRNA 0.54 2 23766485 23769612

Neighbor

gene id symbol gene type direction distance location
rnf26 rnf26 coding upstream 16355 23745184 ~ 23750130 (+)
cbl cbl coding upstream 128273 23556717 ~ 23638212 (+)
LOC103034742 grik4,LOC108439963,LOC108277597 coding upstream 266256 23148011 ~ 23500229 (+)
LOC103038567 LOC108436528 coding upstream 1151976 22533679 ~ 22614509 (+)
LOC103034910 tmem136,LOC108436527,LOC107709136,LOC107586230,LOC107657235,LOC107601721,LOC107696007,LOC107717274 coding upstream 1237202 22521242 ~ 22529283 (+)
LOC103047782 phykpl,LOC108439974,LOC108277665,LOC107743705,LOC107683819,LOC107585546 coding downstream 126880 23896492 ~ 23909676 (+)
bcas3 bcas3,LOC107743646,LOC107664928 coding downstream 179779 23949391 ~ 24473546 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding downstream 717210 24486822 ~ 24495457 (+)
tbx4 tbx4 coding downstream 749550 24519162 ~ 24558604 (+)
kiaa0753 NA coding downstream 969279 24738891 ~ 24776461 (+)
G13043 NA non-coding upstream 42051 23710556 ~ 23724434 (+)
G13028 NA non-coding upstream 55947 23610250 ~ 23710538 (+)
G13012 NA non-coding upstream 115247 23543555 ~ 23651238 (+)
G13029 NA non-coding upstream 119650 23622224 ~ 23646835 (+)
G13025 NA non-coding upstream 146288 23572041 ~ 23620197 (+)
G13065 NA non-coding downstream 70676 23840288 ~ 23843275 (+)
G13068 NA non-coding downstream 87379 23856991 ~ 23857360 (+)
G13069 NA non-coding downstream 87990 23857602 ~ 23857916 (+)
G13103 NA non-coding downstream 201635 23971247 ~ 23971794 (+)
G13105 NA non-coding downstream 230499 24000111 ~ 24019447 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 1248705 22473652 ~ 22517780 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other upstream 1381513 22300996 ~ 22384972 (+)
G12362 bco2b,LOC108436497,LOC107586303,LOC107657247 other upstream 2302836 21459850 ~ 21463649 (+)
LOC103033739 gkup,LOC108436512,LOC108278261,LOC106612544,LOC105024033,LOC107709108,LOC107717281,LOC107657260,LOC107586304 other upstream 2776421 20963049 ~ 20990064 (+)
G13067 NA other downstream 84386 23853998 ~ 23855353 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other downstream 931230 24700842 ~ 24722676 (+)
G13237 NA other downstream 1086321 24855933 ~ 24857022 (+)
G13445 spcs2,LOC107677086 other downstream 1282901 25052513 ~ 25056103 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 1477384 25246996 ~ 25339435 (+)

Expression


Co-expression Network