G13105


Basic Information

Item Value
gene id G13105
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 24000111 ~ 24019447 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU17592
taatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttgaatttttacaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaaaactgattaaaaacaagggttattccaccaaatattgattatttctgaactcttaaaactttatgaatatgaactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17592 True 226 lncRNA 0.41 2 24000111 24019447

Neighbor

gene id symbol gene type direction distance location
LOC103047782 phykpl,LOC108439974,LOC108277665,LOC107743705,LOC107683819,LOC107585546 coding upstream 90435 23896492 ~ 23909676 (+)
rnf26 rnf26 coding upstream 249981 23745184 ~ 23750130 (+)
cbl cbl coding upstream 361899 23556717 ~ 23638212 (+)
LOC103034742 grik4,LOC108439963,LOC108277597 coding upstream 499882 23148011 ~ 23500229 (+)
LOC103038567 LOC108436528 coding upstream 1385602 22533679 ~ 22614509 (+)
tbx2 tbx2,tbx2b,LOC107685069,LOC107757046 coding downstream 467375 24486822 ~ 24495457 (+)
tbx4 tbx4 coding downstream 499715 24519162 ~ 24558604 (+)
kiaa0753 NA coding downstream 719444 24738891 ~ 24776461 (+)
LOC103028424 LOC108425893 coding downstream 769829 24789276 ~ 24873126 (+)
LOC103027752 NA coding downstream 960748 24980195 ~ 24982031 (+)
G13103 NA non-coding upstream 28317 23971247 ~ 23971794 (+)
G13069 NA non-coding upstream 142195 23857602 ~ 23857916 (+)
G13068 NA non-coding upstream 142751 23856991 ~ 23857360 (+)
G13065 NA non-coding upstream 156836 23840288 ~ 23843275 (+)
G13051 NA non-coding upstream 230499 23766485 ~ 23769612 (+)
G13106 NA non-coding downstream 22280 24041727 ~ 24122312 (+)
G13111 NA non-coding downstream 84770 24104217 ~ 24145239 (+)
G13122 NA non-coding downstream 158619 24178066 ~ 24215946 (+)
G13128 NA non-coding downstream 180246 24199693 ~ 24249941 (+)
G13137 NA non-coding downstream 215535 24234982 ~ 24235404 (+)
G13067 NA other upstream 144758 23853998 ~ 23855353 (+)
oaf oaf,oafa,LOC107696006,LOC107709135,LOC107586231,LOC107657251,LOC107717291 other upstream 1482331 22473652 ~ 22517780 (+)
spa17 spa17,LOC107709112,LOC107586300,LOC107657238,LOC107717271 other upstream 1615139 22300996 ~ 22384972 (+)
G12362 bco2b,LOC108436497,LOC107586303,LOC107657247 other upstream 2536462 21459850 ~ 21463649 (+)
trnan-guu NA other upstream 3023834 20976204 ~ 20976277 (+)
ccdc9 ccdc9,LOC107548566,LOC107664938 other downstream 681395 24700842 ~ 24722676 (+)
G13237 NA other downstream 836486 24855933 ~ 24857022 (+)
G13445 spcs2,LOC107677086 other downstream 1033066 25052513 ~ 25056103 (+)
LOC103040166 LOC103040166,LOC108426893 other downstream 1227549 25246996 ~ 25339435 (+)
LOC103045399 LOC108426937,LOC108277812 other downstream 1542186 25561633 ~ 25642743 (+)

Expression


Co-expression Network