Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007248680.3 |
| length | 759 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | LOC103045739 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 17705679 ~ 17708597 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0070131 | positive regulation of mitochondrial translation | biological_process |
| GO:0033617 | mitochondrial cytochrome c oxidase assembly | biological_process |
| GO:0031305 | integral component of mitochondrial inner membrane | cellular_component |
| id | description |
|---|---|
| K18175 | CCDC56, COA3; cytochrome c oxidase assembly factor 3, animal type |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49996 | lncRNA | upstream | 7027 | 17693790 ~ 17698652 (+) | True | G37089 |
| TU49973 | lncRNA | upstream | 188090 | 17509967 ~ 17517589 (+) | True | G37068 |
| TU49972 | lncRNA | upstream | 194935 | 17509967 ~ 17510744 (+) | False | G37068 |
| TU49968 | lncRNA | upstream | 196060 | 17509417 ~ 17509619 (+) | True | G37066 |
| TU49962 | lncRNA | upstream | 229908 | 17475418 ~ 17475771 (+) | True | G37060 |
| TU50005 | lncRNA | downstream | 4867 | 17713461 ~ 17713687 (+) | True | G37096 |
| TU50006 | lncRNA | downstream | 5291 | 17713885 ~ 17714091 (+) | True | G37097 |
| TU50021 | lncRNA | downstream | 83432 | 17792026 ~ 17793801 (+) | True | G37108 |
| TU50035 | lncRNA | downstream | 113817 | 17822411 ~ 17828668 (+) | True | G37120 |
| TU50053 | lncRNA | downstream | 184068 | 17892662 ~ 17892962 (+) | True | G37137 |
| XM_007239746.3 | mRNA | upstream | 171402 | 17521497 ~ 17534277 (+) | True | g6pc3 |
| XM_007239745.3 | mRNA | upstream | 174881 | 17521499 ~ 17530798 (+) | False | g6pc3 |
| XM_015603207.2 | mRNA | upstream | 214615 | 17483919 ~ 17491064 (+) | False | tmem101 |
| XM_007239751.3 | mRNA | upstream | 214615 | 17483940 ~ 17491064 (+) | True | tmem101 |
| XM_022669438.1 | mRNA | upstream | 281485 | 17423685 ~ 17424194 (+) | True | LOC111188179 |
| XM_007248683.3 | mRNA | downstream | 88240 | 17796834 ~ 17802617 (+) | True | pagr1 |
| XM_022669230.1 | mRNA | downstream | 170001 | 17878595 ~ 17888249 (+) | True | cabp5 |
| XM_022669231.1 | mRNA | downstream | 188196 | 17896790 ~ 17903709 (+) | True | nif3l1 |
| XM_022669232.1 | mRNA | downstream | 188298 | 17896892 ~ 17903709 (+) | False | nif3l1 |
| XM_022669243.1 | mRNA | downstream | 208270 | 17916864 ~ 17924970 (+) | True | LOC103030008 |
| TU49885 | other | upstream | 423448 | 17279661 ~ 17282231 (+) | False | LOC103027613 |
| TU49869 | other | upstream | 471129 | 17232879 ~ 17234550 (+) | False | cby1 |
| TU49795 | other | upstream | 500646 | 17201497 ~ 17205033 (+) | True | phf5a |
| TU49797 | other | upstream | 686795 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU50007 | other | downstream | 6535 | 17715129 ~ 17715992 (+) | True | G37098 |
| TU50008 | other | downstream | 9637 | 17718231 ~ 17719376 (+) | True | G37099 |
| TU50046 | other | downstream | 149323 | 17857917 ~ 17863066 (+) | True | G37131 |
| TU50069 | other | downstream | 243986 | 17952580 ~ 17960304 (+) | True | G37152 |
| TU50074 | other | downstream | 253346 | 17961940 ~ 17970999 (+) | True | G37155 |
