RNA id: TU311701


Basic Information

Item Value
RNA id TU311701
length 368
lncRNA type inter_gene
GC content 0.46
exon number 3
gene id G229286
representative False

Chromosome Information

Item Value
chromosome id NW_019170708.1
NCBI id APWO02000306.1
chromosome length 628061
location 483899 ~ 486756 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtgtgttagtgggtgtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgagtgtgtgttagtgagtgtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgggtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgggtgtgtgttagtgagtgtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgagtgtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgggtgtgtgttagtgggtgtgtgttagtgagtgtgtgttaatgagtgtgtgttagtgagtgtgtgttagtgggtgtgtgttagtgggtgtgtgttagtgggtgtgtgttagtgggtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU311675 lncRNA downstream 82287 401180 ~ 401612 (-) True G229272
TU311674 lncRNA downstream 101649 379058 ~ 382250 (-) True G229271
TU311672 lncRNA downstream 104925 377375 ~ 378974 (-) True G229270
TU311670 lncRNA downstream 111395 372055 ~ 372504 (-) True G229268
TU311667 lncRNA downstream 114744 368692 ~ 369155 (-) True G229267
TU311685 lncRNA upstream 5164 491920 ~ 492783 (-) False G229274
TU311686 lncRNA upstream 5164 491920 ~ 492783 (-) False G229274
TU311688 lncRNA upstream 5164 491920 ~ 494237 (-) True G229274
TU311677 lncRNA upstream 8079 494835 ~ 495959 (-) True G229273
TU311681 lncRNA upstream 8079 494835 ~ 495959 (-) False G229273
XM_015602868.2 mRNA downstream 12935 452117 ~ 470964 (-) True LOC103036421
XM_022685600.1 mRNA downstream 63116 404550 ~ 420783 (-) True LOC103026596
XM_022685599.1 mRNA downstream 81295 309323 ~ 402604 (-) True LOC103022950
XM_022685590.1 mRNA downstream 334116 143901 ~ 149783 (-) True LOC111196372
XM_022685598.1 mRNA upstream 11513 498269 ~ 518817 (-) True LOC103036123
XM_022685588.1 mRNA upstream 41647 528403 ~ 546704 (-) False tbc1d24
XM_022685589.1 mRNA upstream 41647 528403 ~ 545045 (-) False tbc1d24
XM_022685587.1 mRNA upstream 41647 528403 ~ 545045 (-) True tbc1d24
XM_022685602.1 mRNA upstream 75150 561906 ~ 568087 (-) True LOC103029896
TU311617 other downstream 260586 173215 ~ 223313 (-) True G229233

Expression Profile