Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007232228.3 |
| length | 762 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | LOC103043029 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NW_019172936.1 |
| NCBI id | APWO02000145.1 |
| chromosome length | 1987809 |
| location | 1624761 ~ 1628818 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02128 | ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU466195 | lncRNA | upstream | 17742 | 1606626 ~ 1607019 (+) | True | G338762 |
| TU466183 | lncRNA | upstream | 68130 | 1554515 ~ 1556631 (+) | True | G338754 |
| TU466175 | lncRNA | upstream | 81747 | 1542137 ~ 1543014 (+) | True | G338748 |
| XR_002649791.1 | lncRNA | upstream | 88427 | 1527674 ~ 1536334 (+) | True | LOC111192050 |
| TU466180 | lncRNA | upstream | 107793 | 1514660 ~ 1516968 (+) | True | G338752 |
| TU466268 | lncRNA | downstream | 71966 | 1700784 ~ 1701076 (+) | True | G338817 |
| TU466281 | lncRNA | downstream | 225779 | 1854597 ~ 1860367 (+) | True | G338826 |
| TU466298 | lncRNA | downstream | 249631 | 1878449 ~ 1952537 (+) | False | G338841 |
| TU466303 | lncRNA | downstream | 323796 | 1952614 ~ 1955333 (+) | False | G338841 |
| XM_022668515.1 | mRNA | upstream | 34765 | 1580113 ~ 1589996 (+) | True | LOC103043644 |
| XM_007232230.2 | mRNA | upstream | 34765 | 1587819 ~ 1589996 (+) | False | LOC103043644 |
| XM_022668474.1 | mRNA | upstream | 441780 | 1165793 ~ 1182981 (+) | True | LOC103038537 |
| XM_022668521.1 | mRNA | upstream | 625480 | 990438 ~ 999281 (+) | True | LOC103028207 |
| XM_022668492.1 | mRNA | upstream | 766479 | 832711 ~ 858282 (+) | False | LOC103028631 |
| XM_007232229.2 | mRNA | downstream | 6069 | 1634887 ~ 1646466 (+) | True | ube2z |
| XM_022668503.1 | mRNA | downstream | 33962 | 1662780 ~ 1724118 (+) | True | igf2bp1 |
| XM_022668504.1 | mRNA | downstream | 33962 | 1662780 ~ 1724118 (+) | False | igf2bp1 |
| XM_007232227.3 | mRNA | downstream | 98633 | 1727451 ~ 1734615 (+) | True | LOC103042716 |
| XM_022668483.1 | mRNA | downstream | 134471 | 1763289 ~ 1767948 (+) | True | LOC111192052 |
| TU466019 | other | upstream | 608823 | 1012171 ~ 1015938 (+) | False | LOC111192066 |
| TU466020 | other | upstream | 608823 | 1012171 ~ 1015938 (+) | False | LOC111192066 |
| TU465696 | other | upstream | 1240507 | 379881 ~ 384254 (+) | True | G338430 |
| TU465693 | other | upstream | 1240776 | 379881 ~ 383985 (+) | False | G338430 |
| TU466304 | other | downstream | 322158 | 1950976 ~ 1954313 (+) | True | G338841 |
