RNA id: TCONS_00012481



Basic Information


Item Value
RNA id TCONS_00012481
length 1208
RNA type mRNA
GC content 0.42
exon number 6
gene id XLOC_006443
representative True

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 9020301 ~ 9045882 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aacaaaGCAACTGTTGTGTTTATGAATAGGTCAAGGATGAATCGACtctcacaatttatttaaatccacagattcattcacaaaaaatAACCCACTCTAGCCTAAATAAGGACCGAACCTATGTGAACGCTAACAGaatcctttACCAACGTTGCGTCTTGGCAAGTCATCTGATGTGCGTCAAGGTGAATTTGGGGTTACCATGGGGAGCCCCTTTTCTCTTAAAAACACCATCACATCTGGAATCGTCAGCTCTGCTCAGAGAGGCAGTAAAGAACTGGGTCTCTCCAACTCCAACATGGACTACATCCAGACGGACGCTACCATAGATGATGGTGAGGTCATCGGCATTAATACCATGAAAGTGACAGCAGGGATTTCCTTCGCTATTCCCTCAGACAGAGTCCGTCTCTTCCTAGACCGATCTGCAGACAAACAGAAGTCTTGGTTTGGAGAATCGGGATCGAAAAGGCGTTACATTGGAGTGATGATGTTGATTTTGACCCCCAGTATAATCGAAGAGCTAAGGATGCGAGACCCGTCCTTCCCTGATGTTTCTCATGGAGTTCTCATCCACCGTGTGATTGTAGGATCTCCAGCCAACAGaGCCGGAATGAAGCCAGGACATGTTATTATTGAGATCAATGGGGTAAAGGTGAACATGTCGGAGGAGATATATAATGCTGTGAGGACCAGCGAAAGCTTAAATGTGGTGGTCCGCCGGGGGGCCGACCTGCTCATGCTGCACATGACCCCAGAGTCCACAGAGTGACATCAAGTCAAGTATTTAGTAAGATTAAGAAATGGTGAGTAATGAAAAGCTGTCATAGTTGGAGCTGTTGTAAGAAAGGAATCATCTAAAGAGTTGAACATTTTTAGCAAACGCTGGACATTCGTGTAGTAAACGTGTTTCTGGAAGCGTATGAAATAATGTGGATGATTCAGACTTCTGTACACTGgataaacctcagtgtgtctgcGCAAACTACACTATCAGTATTGATTTGAAGGAATATCACTGAATATTTTGTTTAGGATTGTCATGATGGCAACAAACACTCAACGACCTTAATAAAACTGGGTGCTCTTATAGTGAAAAtgctgatgttttgtattgagtctcacattctcatgttacgacgtttgtattttaatacatttttctgaacAGCTCTGATTTCACAATAAACCATTGGAATATTTATGGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137454

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00013463 lncRNA downstream 4082 9009035 ~ 9016226 (-) False XLOC_006442
TCONS_00013751 lncRNA downstream 13711 9002682 ~ 9006597 (-) False XLOC_006442
TCONS_00012466 lncRNA downstream 237816 8781540 ~ 8782492 (-) True XLOC_006438
TCONS_00012465 lncRNA downstream 238738 8781046 ~ 8781570 (-) False XLOC_006438
TCONS_00012463 lncRNA downstream 243831 8760694 ~ 8776477 (-) False XLOC_006437
TCONS_00012518 lncRNA upstream 242958 9288840 ~ 9291568 (-) False XLOC_006449
TCONS_00012516 lncRNA upstream 242958 9288840 ~ 9291685 (-) False XLOC_006449
TCONS_00012524 lncRNA upstream 310207 9356089 ~ 9362323 (-) False XLOC_006453
TCONS_00013752 lncRNA upstream 310207 9356089 ~ 9367689 (-) False XLOC_006453
TCONS_00012527 lncRNA upstream 316106 9361988 ~ 9367041 (-) False XLOC_006453
TCONS_00012469 mRNA downstream 127794 8847421 ~ 8892514 (-) False XLOC_006441
TCONS_00012470 mRNA downstream 131974 8848426 ~ 8888334 (-) True XLOC_006441
TCONS_00012468 mRNA downstream 190916 8825192 ~ 8829392 (-) True XLOC_006440
TCONS_00012467 mRNA downstream 204778 8799168 ~ 8815530 (-) True XLOC_006439
TCONS_00012464 mRNA downstream 234698 8777633 ~ 8785610 (-) False XLOC_006438
TCONS_00012482 mRNA upstream 4026 9049908 ~ 9070754 (-) False XLOC_006442
TCONS_00012483 mRNA upstream 4026 9049908 ~ 9070755 (-) False XLOC_006442
TCONS_00012484 mRNA upstream 4026 9049908 ~ 9070758 (-) False XLOC_006442
TCONS_00012485 mRNA upstream 4135 9050017 ~ 9061951 (-) False XLOC_006442
TCONS_00012487 mRNA upstream 28915 9074797 ~ 9091354 (-) False XLOC_006444
TCONS_00012477 other downstream 11067 9003127 ~ 9009241 (-) False XLOC_006442
TCONS_00012459 other downstream 364861 8655119 ~ 8655447 (-) True XLOC_006435
TCONS_00012458 other downstream 370257 8649711 ~ 8650051 (-) True XLOC_006434
TCONS_00012435 other downstream 2700150 6288544 ~ 6320158 (-) False XLOC_006416
TCONS_00012432 other downstream 2767794 6247987 ~ 6252514 (-) True XLOC_006414
TCONS_00012519 other upstream 249803 9295685 ~ 9300241 (-) True XLOC_006449
TCONS_00012525 other upstream 315928 9361810 ~ 9367689 (-) False XLOC_006453
TCONS_00012528 other upstream 316344 9362226 ~ 9368535 (-) True XLOC_006453
TCONS_00012530 other upstream 394446 9440328 ~ 9442332 (-) True XLOC_006454
TCONS_00012547 other upstream 1034145 10080027 ~ 10114880 (-) False XLOC_006467

Expression Profile


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