RNA id: CI01000004_14742838_14744316.mRNA



Basic Information


Item Value
RNA id CI01000004_14742838_14744316.mRNA
length 828
RNA type mRNA
GC content 0.39
exon number 3
gene id CI01000004_14742838_14744316
representative False

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14742807 ~ 14744507 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGATGTAAATCATAAAGGTCTTTTCTAACTATAAACCTGATGATGGTGATGATCTCAACAGAAGAAGCTCCTCCTATAAAGTTTTGTAGGTCGACTACATCACAGAGACGCAAAAACAAGAAGAGACTCAAAACTCCTCAGTTTATTTTTTATGACTTTGGTGATTTCATTTGGAAAGCACAACAGACATAATGACATACTGGAAAAGGGTGGTTCTCATTCTCTTCACATATTTGTGGGGCTGTGATTCTCTGGACAGTGTTGAACAGAAAACAAGAGTTCAGATTGCTTTTGAAGGTGAATCAGTAACAATCAACTGTACATATTCAACCACTGATTCATTTCCATATCTCTTCTGGTACCAGCAAAAAATAAATGGATTCCCTAAATATATGCTGAAGAAATATCCCGGATCTGGTGTGAGTTTTGGAGATGAAATCACACCAGACAGCACTGAAGAGTCTGCTGCAGAGGGTTCAACTGTTACATTATCCTGCAGTTATTCATCTGCAGATTATCTATACTGGTACCGTCAGTATCCTGGATCAGCTCCTGAATTTCTTGTGCTTAAAATAGAGAGTGTGAAAGACACTAAGACATCGGCGGTAGATCCCAGGTTCTCTACTAAGATCAGAAAAGAAAAACAAGAAACAAAAGAGATCAAACGTGTGTATCTGGAGATCTCCTCTGCTGCAGTATCAGACTCTGCTCTGTATTACTGTGCTCTGAGGCCCACAGTCACAGGAAACACAAGAACACTGTACAAAAACCTGACACAACTGAAGGTGTACTACTAATTTCCTTCCATAAAAATCTATCCGAATTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU39122 lncRNA downstream 35687 14706723 ~ 14707120 (-) True G34479
TU39083 lncRNA downstream 49489 14687437 ~ 14693318 (-) True G34461
TU38283 lncRNA downstream 123821 14618653 ~ 14618986 (-) True CI01000004_14618502_14618962
TU38275 lncRNA downstream 129362 14613415 ~ 14613445 (-) True G33768
TU38265 lncRNA downstream 153779 14588598 ~ 14589028 (-) True G33758
TU39155 lncRNA upstream 10418 14756376 ~ 14756654 (-) True CI01000004_14756092_14758171
TU39158 lncRNA upstream 13190 14757697 ~ 14758230 (-) True CI01000004_14756092_14758171
TU39125 lncRNA upstream 21177 14766045 ~ 14766157 (-) True G34481
TU39163 lncRNA upstream 23577 14768084 ~ 14768531 (-) True CI01000004_14758580_14768474
TU39165 lncRNA upstream 26740 14771247 ~ 14771381 (-) True G34507
CI01000004_14727229_14729780.mRNA mRNA downstream 12912 14726932 ~ 14729895 (-) True CI01000004_14727229_14729780
CI01000004_14725359_14726043.mRNA mRNA downstream 15962 14725272 ~ 14726845 (-) True CI01000004_14725359_14726043
CI01000004_14722691_14723147.mRNA mRNA downstream 19570 14722581 ~ 14723237 (-) False CI01000004_14722691_14723147
CI01000004_14713133_14720728.mRNA mRNA downstream 22013 14712987 ~ 14720794 (-) False CI01000004_14713133_14720728
CI01000004_14709151_14709649.mRNA mRNA downstream 33088 14709059 ~ 14709719 (-) True CI01000004_14709151_14709649
CI01000004_14749034_14751685.mRNA mRNA upstream 3797 14748304 ~ 14753596 (-) False CI01000004_14749034_14751685
CI01000004_14754775_14755334.mRNA mRNA upstream 10240 14754747 ~ 14755749 (-) False CI01000004_14754775_14755334
CI01000004_14756092_14758171.mRNA mRNA upstream 11307 14755814 ~ 14758237 (-) False CI01000004_14756092_14758171
CI01000004_14758580_14768474.mRNA mRNA upstream 14021 14758528 ~ 14768680 (-) False CI01000004_14758580_14768474
CI01000004_14770317_14773615.mRNA mRNA upstream 25779 14770286 ~ 14774000 (-) False CI01000004_14770317_14773615
TU39139 other downstream 19588 14723108 ~ 14723219 (-) True CI01000004_14722691_14723147
TU39140 other downstream 22007 14720198 ~ 14720800 (-) True CI01000004_14713133_14720728
TU39093 other downstream 63100 14679139 ~ 14679707 (-) True CI01000004_14676793_14679785
TU39081 other downstream 69792 14672539 ~ 14673015 (-) True G34459
TU38297 other downstream 104333 14637851 ~ 14638474 (-) True G33783
TU39154 other upstream 6664 14751171 ~ 14751719 (-) True CI01000004_14749034_14751685
TU39156 other upstream 11431 14755938 ~ 14756654 (-) False CI01000004_14756092_14758171
TU39120 other upstream 37624 14782131 ~ 14782656 (-) True CI01000004_14775109_14792782
TU39186 other upstream 63545 14808052 ~ 14808529 (-) True CI01000004_14808034_14808645
TU39197 other upstream 83123 14827630 ~ 14828123 (-) True CI01000004_14827536_14831360

Expression Profile