RNA id: CI01000004_14758580_14768474.mRNA


Basic Information

Item Value
RNA id CI01000004_14758580_14768474.mRNA
length 1554
RNA type mRNA
GC content 0.40
exon number 8
gene id CI01000004_14758580_14768474
representative False

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14758528 ~ 14768680 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAATATTTTTTGAATAGTTTTTACTCTTCAAATATTTTTGAACATTTTGTTTCTATATTACATTGATGTTTTTGCTCAATTGTAAACTGACGAACAGCATCATCTCAACAGAGAGCAGGAAGTTTCTGAGTGACTTTATGACTCAGTTCCTCCTGAGTAACTGCAGAAACTCAGAGCATCAACACAACTGATCTGACTTAGTGAACATGGACAGACACTTGGTTCTGATTTTAATCATGACTTCAGGTATAATGGCTGCAGATCAGATTGGGCCAAATAAGGGTGCAGATTTCATCCATACAGAAGGAGAGTCTGTGACATTGAGCTGCTCATATGAAACAGACAGCAATACAGTTACACTTTACTGGTACAGACAGTATCCTAATAGTGAACCTCAGTATTTAATATGGAAATATGCTCGTTCATATAGTGGTACTGGGAACCCCTCTGATCCTCGCTTTCAGTCGACTACATCACGTGTGATAGCTGAGGACCTGATTTGGCCAAATATGGGTTCAAATCTCATCATTAGAGAAGGAGAGTCTGTGACACTGAGATGCTCATGTGACACAAGCAGCAGTTATGTCAGACTTTACTGGTACAAGCAGTATCCTAATAGAGAACTTCAGTATTTAATGTTTCAGGTGTCGATATCCCGATCAACCAATAACCTCATTAATGATGATGTGACTCTGTCAGATGCAGCTCTTTTGAAAAGTTTCTGGATGCTACAAATGCATATCTCTTCTGGATGCTTTGGGAAAGACACTGTTAATCAGTCAAGTGAGACAAAAACTGCCACTGAAGGACATCAGGTTACCCTGAGCTGTGAATATGAAACACTTCAGTCTGCTCCATATCTTTTCTGGTACATTCAACGCTTTAATGACCTTCCTGAATATATACTGATGAAATACAAATATGGATCGAGTGCATTTGCTGATAGCATTGGTCCAGCTGACAAGGATACTAATATGATCAGAAGAGAAGGAGAGTCTGTGACACTGAGATGCTCATATGATACAAGCAGCAATGATGTTTTGCTTTACTGGTACAGACAGTATCCAAACAGAGAACCAGAATATTTACTGTATAAAGGGTGTAAATCTGAGGAAGCCGTCCACCAGAATATGAGAGTTCAAACTGCTGTTGAAGAATGCAGACTAGATACAGTTGATCAGCCAGATAAACATGTAACTAAACCTGAAGGAGGATCAGTCACATTACAGTGCAAATATACTGCATCTACAACACCACCACCAGACCTCTTCTGGTACATCCAGAGAGAAAACAACATTCCTAAATACATGCTGAGGAAAAACAAATATGGAGGAGATCAGGACACTGAGTTCCCGGAGAGATTTCACCCGGATGTGTCATCAGACTCAGTTCCTCTGATGATCAAGGATCTGCGTGTGTCTGACTCTGCTGTGTATTACTGTGCTCTGAAGCCCACAGTCACAGGAAACACATCAGATCAGATCAAAAACCTGTTACAATGAGAGACAAGAAAGATACTAATTCTTATACTGTCCTATTTGACAAATCATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU39158 lncRNA downstream 298 14757697 ~ 14758230 (-) True CI01000004_14756092_14758171
TU39155 lncRNA downstream 1874 14756376 ~ 14756654 (-) True CI01000004_14756092_14758171
TU39122 lncRNA downstream 51408 14706723 ~ 14707120 (-) True G34479
TU39083 lncRNA downstream 65210 14687437 ~ 14693318 (-) True G34461
TU38283 lncRNA downstream 139542 14618653 ~ 14618986 (-) True CI01000004_14618502_14618962
TU39165 lncRNA upstream 2567 14771247 ~ 14771381 (-) True G34507
TU39166 lncRNA upstream 5602 14774282 ~ 14774641 (-) False CI01000004_14775109_14792782
TU39121 lncRNA upstream 37321 14806001 ~ 14806506 (-) True G34478
TU39193 lncRNA upstream 49046 14817726 ~ 14818156 (-) True CI01000004_14815294_14818132
TU39117 lncRNA upstream 69009 14837689 ~ 14838322 (-) True G34474
CI01000004_14756092_14758171.mRNA mRNA downstream 291 14755814 ~ 14758237 (-) False CI01000004_14756092_14758171
CI01000004_14754775_14755334.mRNA mRNA downstream 2779 14754747 ~ 14755749 (-) False CI01000004_14754775_14755334
CI01000004_14749034_14751685.mRNA mRNA downstream 4932 14748304 ~ 14753596 (-) False CI01000004_14749034_14751685
CI01000004_14742838_14744316.mRNA mRNA downstream 14021 14742807 ~ 14744507 (-) False CI01000004_14742838_14744316
CI01000004_14727229_14729780.mRNA mRNA downstream 28633 14726932 ~ 14729895 (-) True CI01000004_14727229_14729780
CI01000004_14770317_14773615.mRNA mRNA upstream 1606 14770286 ~ 14774000 (-) False CI01000004_14770317_14773615
CI01000004_14775109_14792782.mRNA mRNA upstream 5604 14774284 ~ 14792784 (-) False CI01000004_14775109_14792782
CI01000004_14794085_14794548.mRNA mRNA upstream 25352 14794032 ~ 14794593 (-) True CI01000004_14794085_14794548
CI01000004_14802126_14805324.mRNA mRNA upstream 32621 14801301 ~ 14805738 (-) True CI01000004_14802126_14805324
CI01000004_14808034_14808645.mRNA mRNA upstream 39258 14807938 ~ 14808969 (-) False CI01000004_14808034_14808645
TU39156 other downstream 1874 14755938 ~ 14756654 (-) False CI01000004_14756092_14758171
TU39154 other downstream 6809 14751171 ~ 14751719 (-) True CI01000004_14749034_14751685
TU39147 other downstream 14192 14743852 ~ 14744336 (-) True CI01000004_14742838_14744316
TU39139 other downstream 35309 14723108 ~ 14723219 (-) True CI01000004_14722691_14723147
TU39140 other downstream 37728 14720198 ~ 14720800 (-) True CI01000004_14713133_14720728
TU39120 other upstream 13451 14782131 ~ 14782656 (-) True CI01000004_14775109_14792782
TU39186 other upstream 39372 14808052 ~ 14808529 (-) True CI01000004_14808034_14808645
TU39197 other upstream 58950 14827630 ~ 14828123 (-) True CI01000004_14827536_14831360
TU39317 other upstream 242681 15011361 ~ 15025221 (-) True G34632
TU39354 other upstream 282496 15051176 ~ 15052775 (-) False G34668

Expression Profile