RNA id: CI01000004_14808034_14808645.mRNA



Basic Information


Item Value
RNA id CI01000004_14808034_14808645.mRNA
length 927
RNA type mRNA
GC content 0.37
exon number 2
gene id CI01000004_14808034_14808645
representative False

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14807938 ~ 14808969 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTTGCAATTCATAGGGGTGAGTTCAGATATAGAGAACTTAGTTCATCTGGTGCAAGTCATGTTTCAGTGATAAACAGAAAGTTATTTGACCTGAAAAGTCATTCAACAGAAAAGTTTTGTTTGTTACAGATCTCACATTTATCAAAGCCATTTTAATTGGCACCATAATTTCACATAATGACATAATCTTCCCATATAGCGCTGTTAATATTATTGGCTCATTAATCATTCATATTTTTTCTTAGGCAAAATCATCTGCTAAATAAATAAATAAATAAGTGTATCTGTCATTTCTTGCAGTTGCAAAAGTTGTCCTCTAGGCAATGGCAGAGCAAAATCATGAGAAGTGGAGCATCGCATTGAAAGCAGGAAGTTCCAGCGTGTTTATGTGTGAAACTGCAGAGACTCACAGTAACACAGAGCTACAGCTCAGAGCACGGAGAACATTAATACACAATTCATATGACCGAGTAAACATGGAAAAACACCTGTTTCTGATTTTATTTCTGACTTCAGGTGTGATGACTGCAGACAAGATTGGGCCAAATGAAGAAACTGTTATAAAGAAGGAAGACGAGACTGTGACCCTCAGCTGCTCATATGAAACAGACAGCAGTAATGTTAGACTTTACTGGTACAGACAGTATCTTAATGGAGAGCCTCAGTATTTAATATGGAAAAATGCTCGTTCATATAGTAATACTGGAAGCCCCTCTGATCCTCGCTTTCAGTCGACTACATCACGTACAACCACTGAACTCATTATTAACAGTGTGACTCTGTCAGATTCAGCTCTCTATTATTGTGCTCTATTAGTTGGAGCCCAGTGATACAAAGTCTATGTGAAGCTGTACAAAAACTCAAATTCATTTTTCACTTTGATCTCAAGCCACATCAAACCCACAATCTATAATTCACATAATATA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU39121 lncRNA downstream 1432 14806001 ~ 14806506 (-) True G34478
TU39166 lncRNA downstream 33297 14774282 ~ 14774641 (-) False CI01000004_14775109_14792782
TU39165 lncRNA downstream 36337 14771247 ~ 14771381 (-) True G34507
TU39163 lncRNA downstream 39407 14768084 ~ 14768531 (-) True CI01000004_14758580_14768474
TU39125 lncRNA downstream 41781 14766045 ~ 14766157 (-) True G34481
TU39193 lncRNA upstream 8757 14817726 ~ 14818156 (-) True CI01000004_14815294_14818132
TU39117 lncRNA upstream 28720 14837689 ~ 14838322 (-) True G34474
TU39111 lncRNA upstream 76856 14885825 ~ 14888056 (-) True G34468
TU39113 lncRNA upstream 80723 14889692 ~ 14893295 (-) True G34470
TU39220 lncRNA upstream 101112 14910081 ~ 14912736 (-) True G34550
CI01000004_14802126_14805324.mRNA mRNA downstream 2200 14801301 ~ 14805738 (-) True CI01000004_14802126_14805324
CI01000004_14794085_14794548.mRNA mRNA downstream 13345 14794032 ~ 14794593 (-) True CI01000004_14794085_14794548
CI01000004_14775109_14792782.mRNA mRNA downstream 15154 14774284 ~ 14792784 (-) False CI01000004_14775109_14792782
CI01000004_14770317_14773615.mRNA mRNA downstream 33938 14770286 ~ 14774000 (-) False CI01000004_14770317_14773615
CI01000004_14758580_14768474.mRNA mRNA downstream 39258 14758528 ~ 14768680 (-) False CI01000004_14758580_14768474
CI01000004_14809409_14811408.mRNA mRNA upstream 254 14809223 ~ 14811709 (-) True CI01000004_14809409_14811408
CI01000004_14815294_14818132.mRNA mRNA upstream 6173 14815142 ~ 14821516 (-) False CI01000004_14815294_14818132
CI01000004_14827536_14831360.mRNA mRNA upstream 18527 14827496 ~ 14831526 (-) False CI01000004_14827536_14831360
CI01000004_14832429_14839825.mRNA mRNA upstream 23182 14832151 ~ 14840019 (-) True CI01000004_14832429_14839825
CI01000004_14843132_14843640.mRNA mRNA upstream 33944 14842913 ~ 14843979 (-) True CI01000004_14843132_14843640
TU39120 other downstream 25282 14782131 ~ 14782656 (-) True CI01000004_14775109_14792782
TU39156 other downstream 51284 14755938 ~ 14756654 (-) False CI01000004_14756092_14758171
TU39154 other downstream 56219 14751171 ~ 14751719 (-) True CI01000004_14749034_14751685
TU39147 other downstream 63602 14743852 ~ 14744336 (-) True CI01000004_14742838_14744316
TU39140 other downstream 87138 14720198 ~ 14720800 (-) True CI01000004_14713133_14720728
TU39197 other upstream 18661 14827630 ~ 14828123 (-) True CI01000004_14827536_14831360
TU39317 other upstream 202392 15011361 ~ 15025221 (-) True G34632
TU39354 other upstream 242207 15051176 ~ 15052775 (-) False G34668
TU39355 other upstream 242207 15051176 ~ 15051869 (-) True G34668
TU39323 other upstream 277702 15087179 ~ 15090358 (-) True G34638

Expression Profile