RNA id: CI01000004_14809409_14811408.mRNA



Basic Information


Item Value
RNA id CI01000004_14809409_14811408.mRNA
length 1204
RNA type mRNA
GC content 0.37
exon number 3
gene id CI01000004_14809409_14811408
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14809223 ~ 14811709 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGAATGAAAATATTTTAAATACAATCATACATGTTTAAGTGTCTGAAGTGTAGATTATCAGTAACTTCAAATATTGACACTACAGTATTCTGTCATGTGCTTCATGAATAATAACTGAAAAATTGACTGAAATCTATTTACAATAATATCCTGAAGAGGGCAGTGTAGACACTTAAAATCTGTTATTTTCTTATTTTAAATCTGTTTAACCTCCCCTCGCTGTTATACACCATCCTCATTCTTACTGACACAACTGACTGAATTACTCTCTTTTTCTCCTGTTTCAGTCACCACATAAAATATGATAATTCTTAGGTTGTTGAACTTGTTCATTTTTGCATCAGTTTATCATGAGTGTCGTGGAGAAGAGAGTGTTGATCAGCCAGATAAACACATGGCCGTATTTGAAGGAAGATCAGTAACAATACAATGCAAATTTAAAACAGCTTCACCGCAACCAGAACTTTTCTGGTACATCCAGAGAGCAAATGACTTTCCAAAATATATCCTGAGGAGAAACAAATATGGAGGAGAAGATAATGATCCTCAGTTTCTGGAGAGATTTCACTCTAAAGTGTCATCAGATTCAGTTCCTCTGACAGTCCAGGACCTGCGTGTGAGTTTTGGAGATGAAATCACACCAGACAGCACTGAAGAGTCTGCTGCAGAGGGTTCAACTGTTACATTATCCTGCAGTTATTCATCTGCAGATTCACTTCTCTGGTACCGTCAGTATCCTGGATCAGCTCCTCAATTTCTTGTGCTTAAAATAGAGAGTGTGAAAGAGACCAAGATAAAGACATCGGAGGTAGATCCCAGATTCTCTACTAAGACCAGAAAAGAAAAACAAGCCCAAAAAGAGATCAAACATGTGGATCTGATCATCTCCTCTGCTGCAGTATCAGACTCTGCTCTGTATTACTGTGCTCTGAGGCCCACAGTCACAGGAAACACTGTAACTCTGTACAAAAACCTGACACAGCTGAAAAGGCATAGCTATAATTATGCCTTCTACTAAACAGACTGAAGCACATAACAATCGAAAGAATCACATTCCCAAACTGCCAATTCAGACACAGAACAAAAGTCTGATGGAACACATTCAAAGACCCATGTTTATAATTACAATAACTTTGTACAAACCCAAAATTAAAGTCATTATATGTGATGTGACTGCTACCAGCATTTACATAAAGAAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU39121 lncRNA downstream 2717 14806001 ~ 14806506 (-) True G34478
TU39166 lncRNA downstream 34582 14774282 ~ 14774641 (-) False CI01000004_14775109_14792782
TU39165 lncRNA downstream 37622 14771247 ~ 14771381 (-) True G34507
TU39163 lncRNA downstream 40692 14768084 ~ 14768531 (-) True CI01000004_14758580_14768474
TU39125 lncRNA downstream 43066 14766045 ~ 14766157 (-) True G34481
TU39193 lncRNA upstream 6017 14817726 ~ 14818156 (-) True CI01000004_14815294_14818132
TU39117 lncRNA upstream 25980 14837689 ~ 14838322 (-) True G34474
TU39111 lncRNA upstream 74116 14885825 ~ 14888056 (-) True G34468
TU39113 lncRNA upstream 77983 14889692 ~ 14893295 (-) True G34470
TU39220 lncRNA upstream 98372 14910081 ~ 14912736 (-) True G34550
CI01000004_14808034_14808645.mRNA mRNA downstream 254 14807938 ~ 14808969 (-) False CI01000004_14808034_14808645
CI01000004_14802126_14805324.mRNA mRNA downstream 3485 14801301 ~ 14805738 (-) True CI01000004_14802126_14805324
CI01000004_14794085_14794548.mRNA mRNA downstream 14630 14794032 ~ 14794593 (-) True CI01000004_14794085_14794548
CI01000004_14775109_14792782.mRNA mRNA downstream 16439 14774284 ~ 14792784 (-) False CI01000004_14775109_14792782
CI01000004_14770317_14773615.mRNA mRNA downstream 35223 14770286 ~ 14774000 (-) False CI01000004_14770317_14773615
CI01000004_14815294_14818132.mRNA mRNA upstream 3433 14815142 ~ 14821516 (-) False CI01000004_14815294_14818132
CI01000004_14827536_14831360.mRNA mRNA upstream 15787 14827496 ~ 14831526 (-) False CI01000004_14827536_14831360
CI01000004_14832429_14839825.mRNA mRNA upstream 20442 14832151 ~ 14840019 (-) True CI01000004_14832429_14839825
CI01000004_14843132_14843640.mRNA mRNA upstream 31204 14842913 ~ 14843979 (-) True CI01000004_14843132_14843640
CI01000004_14846825_14850092.mRNA mRNA upstream 35076 14846785 ~ 14851531 (-) True CI01000004_14846825_14850092
TU39186 other downstream 694 14808052 ~ 14808529 (-) True CI01000004_14808034_14808645
TU39120 other downstream 26567 14782131 ~ 14782656 (-) True CI01000004_14775109_14792782
TU39156 other downstream 52569 14755938 ~ 14756654 (-) False CI01000004_14756092_14758171
TU39154 other downstream 57504 14751171 ~ 14751719 (-) True CI01000004_14749034_14751685
TU39147 other downstream 64887 14743852 ~ 14744336 (-) True CI01000004_14742838_14744316
TU39197 other upstream 15921 14827630 ~ 14828123 (-) True CI01000004_14827536_14831360
TU39317 other upstream 199652 15011361 ~ 15025221 (-) True G34632
TU39354 other upstream 239467 15051176 ~ 15052775 (-) False G34668
TU39355 other upstream 239467 15051176 ~ 15051869 (-) True G34668
TU39323 other upstream 274962 15087179 ~ 15090358 (-) True G34638

Expression Profile