Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000005_01460222_01467970.mRNA |
| length | 1225 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | CI01000005_01460222_01467970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 1460222 ~ 1467992 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K10172 | BRA, T; brachyury protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU41195 | lncRNA | upstream | 157222 | 1302764 ~ 1303000 (+) | True | G36270 |
| TU41169 | lncRNA | upstream | 235612 | 1223766 ~ 1224610 (+) | True | G36244 |
| TU41120 | lncRNA | upstream | 242273 | 1217616 ~ 1217949 (+) | True | G36196 |
| TU41118 | lncRNA | upstream | 246799 | 1212900 ~ 1213423 (+) | True | G36194 |
| TU41087 | lncRNA | upstream | 281393 | 1178616 ~ 1178829 (+) | True | G36163 |
| TU41223 | lncRNA | downstream | 191053 | 1659045 ~ 1659269 (+) | True | G36290 |
| TU41229 | lncRNA | downstream | 197893 | 1665885 ~ 1666118 (+) | True | G36294 |
| TU41275 | lncRNA | downstream | 256377 | 1724369 ~ 1727277 (+) | True | G36339 |
| TU41297 | lncRNA | downstream | 299431 | 1767423 ~ 1767898 (+) | True | G36361 |
| TU41298 | lncRNA | downstream | 299945 | 1767937 ~ 1768534 (+) | True | G36362 |
| CI01000005_01431961_01432725.mRNA | mRNA | upstream | 27037 | 1431788 ~ 1433185 (+) | True | CI01000005_01431961_01432725 |
| CI01000005_01398585_01411469.mRNA | mRNA | upstream | 48686 | 1398174 ~ 1411536 (+) | True | CI01000005_01398585_01411469 |
| CI01000005_01373895_01396081.mRNA | mRNA | upstream | 63325 | 1373148 ~ 1396897 (+) | True | CI01000005_01373895_01396081 |
| CI01000005_01348589_01365615.mRNA | mRNA | upstream | 94110 | 1348589 ~ 1366112 (+) | True | CI01000005_01348589_01365615 |
| CI01000005_01305536_01308522.mRNA | mRNA | upstream | 151560 | 1305536 ~ 1308662 (+) | True | CI01000005_01305536_01308522 |
| CI01000005_01567956_01569421.mRNA | mRNA | downstream | 99964 | 1567956 ~ 1570139 (+) | True | CI01000005_01567956_01569421 |
| CI01000005_01587815_01629740.mRNA | mRNA | downstream | 119706 | 1587698 ~ 1629870 (+) | True | CI01000005_01587815_01629740 |
| CI01000005_01641148_01646936.mRNA | mRNA | downstream | 173156 | 1641148 ~ 1647378 (+) | True | CI01000005_01641148_01646936 |
| CI01000005_01748068_01748568.mRNA | mRNA | downstream | 278126 | 1746118 ~ 1748654 (+) | True | CI01000005_01748068_01748568 |
| CI01000005_01795371_01878902.mRNA | mRNA | downstream | 327379 | 1795371 ~ 1878956 (+) | True | CI01000005_01795371_01878902 |
| TU40375 | other | upstream | 936441 | 491908 ~ 523781 (+) | False | G35533 |
| TU41148 | other | downstream | 35151 | 1503143 ~ 1537804 (+) | True | G36223 |
| TU41224 | other | downstream | 191741 | 1659733 ~ 1661032 (+) | True | G36291 |
| TU42433 | other | downstream | 2254752 | 3722744 ~ 3723503 (+) | True | G37392 |
| TU43730 | other | downstream | 3267354 | 4735346 ~ 4736857 (+) | True | CI01000005_04735429_04736817 |
| TU45244 | other | downstream | 5529552 | 6997544 ~ 6998340 (+) | True | G39930 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00011370 | True | 1583 | mRNA | 0.49 | 8 | NC_007124.7 | 4440869 ~ 4453663 (+) |
