RNA id: TU144632



Basic Information


Item Value
RNA id TU144632
length 211
lncRNA type read_through
GC content 0.28
exon number 2
gene id G127294
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 1471683 ~ 1519199 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAATAAATGATGTTCTTTTGAATTTACTATTTATCAAAGAATCCTGAAAAAAAATGTATCACTTATTCCACAAAAAAATTAAATTTCTGTCATTTAGTACTCGCCCTTATGTTGTTCCAAACTCATAAGACCTTCGTTCATTTTCGGAACACAAATTAAGATATTTTTGATGAAATCCGAGTATATGACTCATCCATAGACAGCAATATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU144619 lncRNA downstream 61137 1408930 ~ 1410546 (-) True G127282
TU144615 lncRNA downstream 70755 1399306 ~ 1400928 (-) True G127279
TU144614 lncRNA downstream 78075 1393407 ~ 1393608 (-) True G127278
TU144611 lncRNA downstream 83487 1387979 ~ 1388196 (-) True G127275
TU144573 lncRNA downstream 209279 1262190 ~ 1262404 (-) True G127240
TU144682 lncRNA upstream 50584 1569783 ~ 1569994 (-) True G127342
TU144683 lncRNA upstream 51675 1570874 ~ 1571089 (-) True G127343
TU144689 lncRNA upstream 53570 1572769 ~ 1573045 (-) True G127349
TU144690 lncRNA upstream 54567 1573766 ~ 1573972 (-) True G127350
TU144692 lncRNA upstream 56590 1575789 ~ 1576024 (-) True G127352
CI01000026_01452548_01454060.mRNA mRNA downstream 17623 1451839 ~ 1454060 (-) True CI01000026_01452548_01454060
CI01000026_01433833_01436599.mRNA mRNA downstream 35084 1433820 ~ 1436599 (-) True CI01000026_01433833_01436599
CI01000026_01384408_01386103.mRNA mRNA downstream 85580 1384364 ~ 1386103 (-) True CI01000026_01384408_01386103
CI01000026_01341481_01348949.mRNA mRNA downstream 122734 1341133 ~ 1348949 (-) True CI01000026_01341481_01348949
CI01000026_01263538_01270706.mRNA mRNA downstream 200977 1263484 ~ 1270706 (-) True CI01000026_01263538_01270706
CI01000026_01660894_01664126.mRNA mRNA upstream 141312 1660511 ~ 1665349 (-) True CI01000026_01660894_01664126
CI01000026_01855346_01933699.mRNA mRNA upstream 335485 1854684 ~ 1933699 (-) True CI01000026_01855346_01933699
CI01000026_02124326_02125256.mRNA mRNA upstream 604917 2124116 ~ 2125256 (-) True CI01000026_02124326_02125256
CI01000026_02267615_02268297.mRNA mRNA upstream 748103 2267302 ~ 2268335 (-) True CI01000026_02267615_02268297
CI01000026_02272961_02276148.mRNA mRNA upstream 753051 2272250 ~ 2276786 (-) True CI01000026_02272961_02276148
TU144310 other downstream 469094 999847 ~ 1002589 (-) True G127016
TU144773 other upstream 216578 1735777 ~ 1736106 (-) False G127418
TU146987 other upstream 1861586 3380785 ~ 3487020 (-) True G129357
TU147118 other upstream 2151375 3670574 ~ 3670884 (-) True G129476
TU147383 other upstream 2848097 4367296 ~ 4373069 (-) True G129658
TU147520 other upstream 3293851 4813050 ~ 4819282 (-) False G129750

Expression Profile