RNA id: TU176408


Basic Information

Item Value
RNA id TU176408
length 206
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G155367
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7011096 ~ 7011301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCCACCGCTTTTTTTTGTGTGTCCTCGGAGTACCTCCATACATAAGTGTGTCAAATTTGGTGAAAATATCTCATTTCTTTTAGGAGTTATAGACATTTATATGCATGAACACGTAAAAACTTAGCGACACCTGACTTTGATTGCATTTTTTTGCCACTTACTTACTATCAAAATTTTGACATTTGGCTATTAGCATATAGTAAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176398 lncRNA upstream 9208 7001439 ~ 7001888 (+) True G155357
TU176306 lncRNA upstream 102463 6906375 ~ 6908633 (+) True CI01000029_06906861_06907157
TU176301 lncRNA upstream 158218 6852476 ~ 6852878 (+) True G155274
TU176280 lncRNA upstream 259318 6751287 ~ 6751778 (+) True G155253
TU176276 lncRNA upstream 263534 6744832 ~ 6747562 (+) True G155249
TU176430 lncRNA downstream 54404 7065705 ~ 7066055 (+) True G155389
TU176440 lncRNA downstream 62991 7074292 ~ 7074548 (+) True G155391
TU176452 lncRNA downstream 164350 7175651 ~ 7175883 (+) True G155402
TU176462 lncRNA downstream 173514 7184815 ~ 7185029 (+) True G155412
TU176467 lncRNA downstream 187846 7199147 ~ 7199713 (+) True G155417
CI01000029_06923683_06924032.mRNA mRNA upstream 87011 6923228 ~ 6924085 (+) True CI01000029_06923683_06924032
CI01000029_06906861_06907157.mRNA mRNA upstream 103709 6905834 ~ 6907387 (+) False CI01000029_06906861_06907157
CI01000029_06865685_06903896.mRNA mRNA upstream 107200 6865685 ~ 6903896 (+) True CI01000029_06865685_06903896
CI01000029_06834812_06849277.mRNA mRNA upstream 161578 6833577 ~ 6849518 (+) True CI01000029_06834812_06849277
CI01000029_06824397_06831521.mRNA mRNA upstream 178425 6823629 ~ 6832671 (+) True CI01000029_06824397_06831521
CI01000029_07132444_07166752.mRNA mRNA downstream 121143 7132444 ~ 7166930 (+) True CI01000029_07132444_07166752
CI01000029_07206718_07211765.mRNA mRNA downstream 194386 7205687 ~ 7212408 (+) True CI01000029_07206718_07211765
CI01000029_07214426_07214941.mRNA mRNA downstream 203125 7214426 ~ 7214989 (+) True CI01000029_07214426_07214941
CI01000029_07252129_07298828.mRNA mRNA downstream 240828 7252129 ~ 7299846 (+) True CI01000029_07252129_07298828
CI01000029_07304652_07330373.mRNA mRNA downstream 293351 7304652 ~ 7330456 (+) True CI01000029_07304652_07330373
TU176307 other upstream 103664 6906188 ~ 6907432 (+) False CI01000029_06906861_06907157
TU176095 other upstream 520802 6431535 ~ 6490294 (+) False G155083
TU176099 other upstream 520802 6431535 ~ 6490294 (+) True G155083
TU176089 other upstream 722698 6282685 ~ 6288398 (+) True G155079
TU175455 other upstream 1540750 5457241 ~ 5457472 (+) True G154531
TU176602 other downstream 623532 7634833 ~ 7637834 (+) True G155522
TU176707 other downstream 920179 7931480 ~ 7932177 (+) True G155627
TU177125 other downstream 1953517 8964818 ~ 9064541 (+) False G156007

Expression Profile