RNA id: TU322761


Basic Information

Item Value
RNA id TU322761
length 348
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G284787
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 2364877 ~ 2365224 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTTAAAGGAAAGACTAAAGCACAACAAGTGGTGTCAGAAGCGGAGCGCGATTGACAGTCATCAGCGAATTGTGAGTGTGGTGGACTGCTGGGACATCCTTTTTGAGTCGATGGACATTGTAATCACTGCAAAACGTCGTTGTGAATAAGTATTAAAGACTGATTGACCACGTTAGTCGTTGCATTAACCGTGAATTCACGGAGATACGAGCAGCACGGACTTTCCCTTCCCCCAGCGGAGAGGCGTGGCGCTGGCAGTCTGCCAAATCCAGTGCTGCTGTTGGCTGCAAGTTTCACGGACGCTATACCAAACAGCCCTGCAAATCTACGTTGAAACTCACAAGCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322759 lncRNA upstream 122288 2237117 ~ 2242589 (+) True G284785
TU322763 lncRNA upstream 296517 2023415 ~ 2068360 (+) True G284789
TU322858 lncRNA upstream 397564 1967047 ~ 1967313 (+) True G284876
TU322719 lncRNA upstream 425559 1937487 ~ 1939318 (+) True G284745
TU322851 lncRNA upstream 439688 1924112 ~ 1925189 (+) True G284873
TU322885 lncRNA downstream 5457 2370681 ~ 2371362 (+) True G284901
TU322892 lncRNA downstream 15830 2381054 ~ 2381430 (+) True G284907
TU322894 lncRNA downstream 17242 2382466 ~ 2382677 (+) True G284909
TU322916 lncRNA downstream 50076 2415300 ~ 2415510 (+) True G284929
TU322723 lncRNA downstream 53589 2433814 ~ 2433884 (+) True CI01000072_02432156_02442588
CI01000072_02351008_02356285.mRNA mRNA upstream 7797 2351008 ~ 2357080 (+) True CI01000072_02351008_02356285
CI01000072_02348164_02349155.mRNA mRNA upstream 15110 2347632 ~ 2349767 (+) True CI01000072_02348164_02349155
CI01000072_02326222_02344508.mRNA mRNA upstream 19436 2326222 ~ 2345441 (+) True CI01000072_02326222_02344508
CI01000072_02290646_02296564.mRNA mRNA upstream 68116 2290414 ~ 2296761 (+) True CI01000072_02290646_02296564
CI01000072_02282323_02282873.mRNA mRNA upstream 81885 2282323 ~ 2282992 (+) True CI01000072_02282323_02282873
CI01000072_02390649_02398813.mRNA mRNA downstream 23957 2389181 ~ 2399224 (+) True CI01000072_02390649_02398813
CI01000072_02422050_02429020.mRNA mRNA downstream 53227 2418451 ~ 2429431 (+) False CI01000072_02422050_02429020
CI01000072_02432156_02442588.mRNA mRNA downstream 66864 2432088 ~ 2442817 (+) False CI01000072_02432156_02442588
CI01000072_02452424_02456657.mRNA mRNA downstream 86468 2451692 ~ 2456811 (+) True CI01000072_02452424_02456657
CI01000072_02460431_02474361.mRNA mRNA downstream 94519 2459743 ~ 2474404 (+) True CI01000072_02460431_02474361
TU322715 other upstream 379737 1981530 ~ 1985140 (+) True G284742
TU321805 other upstream 2013589 349124 ~ 351288 (+) True CI01000072_00338411_00351144
TU323494 other downstream 1605033 3970257 ~ 3976214 (+) True G285428
TU324691 other downstream 1803880 4169104 ~ 4172093 (+) False G286470
TU324692 other downstream 1803880 4169104 ~ 4175651 (+) True G286470
TU324705 other downstream 1859614 4232318 ~ 4232421 (+) False G286474
TU324694 other downstream 1973495 4338719 ~ 4343183 (+) False CI01000072_04338747_04342064

Expression Profile