RNA id: TU322763



Basic Information


Item Value
RNA id TU322763
length 634
lncRNA type read_through
GC content 0.32
exon number 2
gene id G284789
representative True

Chromosome Information


Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 2023415 ~ 2068360 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGAGATATCCTGAGTGATATTCATCACATTCATTTGAAAATACTCATCATTTTTAACATACATACTCATCGTATGTCCTTCTCACACCTCATATACAAACCCCTTTTCCAGAAAAGTTGGGACATTTTGTAAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGGCTATAGTGTTGATACTGCTGTCGTATTGACTGAAAGCCTTGTCCGATGTCTTTTTGAATCATAACATGAGATGCTAAAATGACAAATGTACTAGTAAATTGCTTGAAAGCATTTACAGCAAAGCGATCATCTTGTTTGTTGATGTTTCTTGATCCTCTTTTATGCAGCAGATACTTTTTGTTAAATGGTGGCATACATGATTAGTTGTGGTGCTTTGTTTCAGTTGGCTGTGAAGTTATATTCCCCTGATTTCTGTAGCTAGTACAGACACCACTTAAGGGGCCTTATTCAAATGGTGTCCAATAAGACACATGCCTTCTCATATGGATAACAGTTCTTCTGATAACTTAGACTTTTTGTGTATGTTACTTTGTGTATTTTTGCATCATTTATTTCCAATGTATGAATAGCTTGTATTAACTGATAAAGAAATAAAACATTTTAAATGCTTTCAAAACGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322858 lncRNA upstream 56102 1967047 ~ 1967313 (+) True G284876
TU322719 lncRNA upstream 84097 1937487 ~ 1939318 (+) True G284745
TU322851 lncRNA upstream 98226 1924112 ~ 1925189 (+) True G284873
TU322850 lncRNA upstream 99850 1923253 ~ 1923565 (+) True G284872
TU322770 lncRNA upstream 100929 1920983 ~ 1922486 (+) True G284796
TU322759 lncRNA downstream 168757 2237117 ~ 2242589 (+) True G284785
TU322761 lncRNA downstream 296517 2364877 ~ 2365224 (+) True G284787
TU322885 lncRNA downstream 302321 2370681 ~ 2371362 (+) True G284901
TU322892 lncRNA downstream 312694 2381054 ~ 2381430 (+) True G284907
TU322894 lncRNA downstream 314106 2382466 ~ 2382677 (+) True G284909
CI01000072_02016536_02023336.mRNA mRNA upstream 54 2016422 ~ 2023361 (+) True CI01000072_02016536_02023336
CI01000072_02000581_02009243.mRNA mRNA upstream 13989 1999640 ~ 2009426 (+) True CI01000072_02000581_02009243
CI01000072_01864149_01879788.mRNA mRNA upstream 143211 1863911 ~ 1880204 (+) True CI01000072_01864149_01879788
CI01000072_01762899_01783522.mRNA mRNA upstream 239455 1762567 ~ 1783960 (+) True CI01000072_01762899_01783522
CI01000072_01724644_01730223.mRNA mRNA upstream 292255 1724452 ~ 1731160 (+) True CI01000072_01724644_01730223
CI01000072_02109877_02133927.mRNA mRNA downstream 41517 2109877 ~ 2134029 (+) True CI01000072_02109877_02133927
CI01000072_02140839_02148226.mRNA mRNA downstream 72479 2140839 ~ 2148649 (+) True CI01000072_02140839_02148226
CI01000072_02163279_02183332.mRNA mRNA downstream 94919 2163279 ~ 2183481 (+) True CI01000072_02163279_02183332
CI01000072_02209186_02258457.mRNA mRNA downstream 140826 2209186 ~ 2258457 (+) True CI01000072_02209186_02258457
CI01000072_02282323_02282873.mRNA mRNA downstream 213963 2282323 ~ 2282992 (+) True CI01000072_02282323_02282873
TU322715 other upstream 38275 1981530 ~ 1985140 (+) True G284742
TU321805 other upstream 1672127 349124 ~ 351288 (+) True CI01000072_00338411_00351144
TU323494 other downstream 1901897 3970257 ~ 3976214 (+) True G285428
TU324691 other downstream 2100744 4169104 ~ 4172093 (+) False G286470
TU324692 other downstream 2100744 4169104 ~ 4175651 (+) True G286470
TU324705 other downstream 2156478 4232318 ~ 4232421 (+) False G286474
TU324694 other downstream 2270359 4338719 ~ 4343183 (+) False CI01000072_04338747_04342064

Expression Profile